CRAN Package Check Results for Package forensim

Last updated on 2020-08-07 01:49:44 CEST.

Check Details

Version: 4.3
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 4.3
Check: R code for possible problems
Result: NOTE
    A2.simu : twoAmodG: no visible global function definition for 'par'
    A2.simu : twoAmodG: no visible global function definition for 'title'
    A2.simu : twoAmodG: no visible global function definition for 'points'
    A2.simu : twoAmodG: no visible global function definition for 'lines'
    A2.simu : twoAmodG: no visible global function definition for 'abline'
    A2.simu : twoAmodG: no visible global function definition for 'legend'
    A2.simu : propFunction : save1: no visible global function definition
     for 'write.table'
    A2.simu : filterFunction : saveHH: no visible global function
     definition for 'write.table'
    A3.simu : threeAmodG: no visible global function definition for 'par'
    A3.simu : threeAmodG: no visible global function definition for 'title'
    A3.simu : threeAmodG: no visible global function definition for
     'points'
    A3.simu : threeAmodG: no visible global function definition for 'lines'
    A3.simu : threeAmodG: no visible global function definition for
     'abline'
    A3.simu : threeAmodG: no visible global function definition for
     'legend'
    A3.simu : propFunction : save1: no visible global function definition
     for 'write.table'
    A3.simu : filterFunction : saveHH: no visible global function
     definition for 'write.table'
    A4.simu : fourAmodG: no visible global function definition for 'par'
    A4.simu : fourAmodG: no visible global function definition for 'title'
    A4.simu : fourAmodG: no visible global function definition for 'points'
    A4.simu : fourAmodG: no visible global function definition for 'lines'
    A4.simu : fourAmodG: no visible global function definition for 'abline'
    A4.simu : fourAmodG: no visible global function definition for 'legend'
    A4.simu : propFunction : save1: no visible global function definition
     for 'write.table'
    A4.simu : filterFunction : saveHH: no visible global function
     definition for 'write.table'
    Hbsimu : Hb.local: no visible global function definition for 'rnorm'
    Hbsimu : Hb.local: no visible global function definition for 'na.omit'
    Hbsimu : Hb.local : plotHb: no visible global function definition for
     'par'
    Hbsimu : Hb.local : plotHb: no visible global function definition for
     'hist'
    LRmixTK : verifAF: no visible global function definition for
     'read.table'
    LRmixTK : verifAF: no visible global function definition for 'read.csv'
    LRmixTK : analyse : veriFile: no visible global function definition for
     'read.table'
    LRmixTK : analyse : veriFile: no visible global function definition for
     'read.csv'
    LRmixTK : analyse : sim.loc: no visible global function definition for
     'quantile'
    LRmixTK : analyse : sim.loc: no visible global function definition for
     'write.table'
    LRmixTK : analyse : sim.loc : Dplot.loc: no visible global function
     definition for 'par'
    LRmixTK : analyse : sim.loc : Dplot.loc: no visible global function
     definition for 'ecdf'
    LRmixTK : analyse : sim.loc : Dplot.loc: no visible global function
     definition for 'grid'
    LRmixTK : analyse : analyse.loc : exportFile : functionMAJ: no visible
     global function definition for 'write.table'
    LRmixTK : analyse : analyse.loc : exportFile2 : functionMAJ: no visible
     global function definition for 'write.table'
    LRmixTK : analyse : analyse.loc : Dplot : locosimu : locosimu.loc: no
     visible global function definition for 'runif'
    LRmixTK : analyse : analyse.loc : Dplot : locosimu: no visible global
     function definition for 'quantile'
    LRmixTK : analyse : analyse.loc : Dplot : Dplot.loc: no visible global
     function definition for 'par'
    LRmixTK : analyse : analyse.loc : Dplot : Dplot.loc: no visible global
     function definition for 'axis'
    LRmixTK : analyse : analyse.loc : Dplot : Dplot.loc: no visible global
     function definition for 'arrows'
    LRmixTK : analyse : analyse.loc : Dplot : Dplot.loc: no visible global
     function definition for 'grid'
    LRmixTK : analyse : analyse.loc : Dplot : Dplot.loc: no visible global
     function definition for 'title'
    LRmixTK : sampleProf : displayprofile: no visible global function
     definition for 'read.table'
    LRmixTK : sampleProf : displayprofile: no visible global function
     definition for 'read.csv'
    mastermix : <anonymous>: no visible global function definition for
     'help'
    naomitab: no visible global function definition for 'na.omit'
    simMixSNP: no visible global function definition for 'write.table'
    simPCR2: no visible global function definition for 'rbinom'
    simPCR2TK : simPCR2TK.local : save : saveFile: no visible global
     function definition for 'write.table'
    simPCR2TK : simPCR2TK.local : logis.frames : logi.regression: no
     visible global function definition for 'glm'
    simPCR2TK : simPCR2TK.local : logis.frames : logi.regression: no
     visible binding for global variable 'binomial'
    simPCR2TK : simPCR2TK.local : logis.frames : logi.regression : saveLog:
     no visible global function definition for 'write.table'
    simPCR2TK : simPCR2TK.local : logis.frames : logi.regression :
     plotglm0: no visible global function definition for 'par'
    simPCR2TK : simPCR2TK.local : logis.frames : logi.regression :
     plotglm0: no visible global function definition for 'predict'
    simPCR2TK : simPCR2TK.local : logis.frames : logi.regression :
     plotglm0: no visible global function definition for 'residuals'
    simPCR2TK : simPCR2TK.local : logis.frames : logi.regression :
     plotglm0: no visible global function definition for 'abline'
    simPCR2TK : simPCR2TK.local : logis.frames : logi.regression :
     plotglm0: no visible global function definition for 'title'
    simufreqD : rdirichlet: no visible global function definition for
     'rgamma'
    simufreqD: no visible global function definition for 'na.omit'
    simupopD : rdirichlet: no visible global function definition for
     'rgamma'
    simupopD: no visible global function definition for 'na.omit'
    wrapdataL: no visible global function definition for 'read.table'
    wrapdataL: no visible global function definition for 'title'
    Undefined global functions or variables:
     abline arrows axis binomial ecdf glm grid help hist legend lines
     na.omit par points predict quantile rbinom read.csv read.table
     residuals rgamma rnorm runif title write.table
    Consider adding
     importFrom("graphics", "abline", "arrows", "axis", "grid", "hist",
     "legend", "lines", "par", "points", "title")
     importFrom("stats", "binomial", "ecdf", "glm", "na.omit", "predict",
     "quantile", "rbinom", "residuals", "rgamma", "rnorm",
     "runif")
     importFrom("utils", "help", "read.csv", "read.table", "write.table")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64

Version: 4.3
Check: for non-standard things in the check directory
Result: NOTE
    Found the following files/directories:
     'sim.txt'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 4.3
Check: compiled code
Result: NOTE
    File ‘forensim/libs/forensim.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 4.3
Check: R code for possible problems
Result: NOTE
    A2.simu : twoAmodG: no visible global function definition for ‘par’
    A2.simu : twoAmodG: no visible global function definition for ‘plot’
    A2.simu : twoAmodG: no visible global function definition for ‘title’
    A2.simu : twoAmodG: no visible global function definition for ‘points’
    A2.simu : twoAmodG: no visible global function definition for ‘lines’
    A2.simu : twoAmodG: no visible global function definition for ‘abline’
    A2.simu : twoAmodG: no visible global function definition for ‘legend’
    A2.simu : propFunction : save1: no visible global function definition
     for ‘write.table’
    A2.simu : filterFunction : saveHH: no visible global function
     definition for ‘write.table’
    A3.simu : threeAmodG: no visible global function definition for ‘par’
    A3.simu : threeAmodG: no visible global function definition for ‘plot’
    A3.simu : threeAmodG: no visible global function definition for ‘title’
    A3.simu : threeAmodG: no visible global function definition for
     ‘points’
    A3.simu : threeAmodG: no visible global function definition for ‘lines’
    A3.simu : threeAmodG: no visible global function definition for
     ‘abline’
    A3.simu : threeAmodG: no visible global function definition for
     ‘legend’
    A3.simu : propFunction : save1: no visible global function definition
     for ‘write.table’
    A3.simu : filterFunction : saveHH: no visible global function
     definition for ‘write.table’
    A4.simu : fourAmodG: no visible global function definition for ‘par’
    A4.simu : fourAmodG: no visible global function definition for ‘plot’
    A4.simu : fourAmodG: no visible global function definition for ‘title’
    A4.simu : fourAmodG: no visible global function definition for ‘points’
    A4.simu : fourAmodG: no visible global function definition for ‘lines’
    A4.simu : fourAmodG: no visible global function definition for ‘abline’
    A4.simu : fourAmodG: no visible global function definition for ‘legend’
    A4.simu : propFunction : save1: no visible global function definition
     for ‘write.table’
    A4.simu : filterFunction : saveHH: no visible global function
     definition for ‘write.table’
    Hbsimu : Hb.local: no visible global function definition for ‘rnorm’
    Hbsimu : Hb.local: no visible global function definition for ‘na.omit’
    Hbsimu : Hb.local : plotHb: no visible global function definition for
     ‘par’
    Hbsimu : Hb.local : plotHb: no visible global function definition for
     ‘hist’
    LRmixTK : verifAF: no visible global function definition for
     ‘read.table’
    LRmixTK : verifAF: no visible global function definition for ‘read.csv’
    LRmixTK : analyse : veriFile: no visible global function definition for
     ‘read.table’
    LRmixTK : analyse : veriFile: no visible global function definition for
     ‘read.csv’
    LRmixTK : analyse : sim.loc: no visible global function definition for
     ‘quantile’
    LRmixTK : analyse : sim.loc: no visible global function definition for
     ‘write.table’
    LRmixTK : analyse : sim.loc : Dplot.loc: no visible global function
     definition for ‘par’
    LRmixTK : analyse : sim.loc : Dplot.loc: no visible global function
     definition for ‘plot’
    LRmixTK : analyse : sim.loc : Dplot.loc: no visible global function
     definition for ‘ecdf’
    LRmixTK : analyse : sim.loc : Dplot.loc: no visible global function
     definition for ‘grid’
    LRmixTK : analyse : analyse.loc : exportFile : functionMAJ: no visible
     global function definition for ‘write.table’
    LRmixTK : analyse : analyse.loc : exportFile2 : functionMAJ: no visible
     global function definition for ‘write.table’
    LRmixTK : analyse : analyse.loc : Dplot : locosimu : locosimu.loc: no
     visible global function definition for ‘runif’
    LRmixTK : analyse : analyse.loc : Dplot : locosimu: no visible global
     function definition for ‘quantile’
    LRmixTK : analyse : analyse.loc : Dplot : Dplot.loc: no visible global
     function definition for ‘par’
    LRmixTK : analyse : analyse.loc : Dplot : Dplot.loc: no visible global
     function definition for ‘plot’
    LRmixTK : analyse : analyse.loc : Dplot : Dplot.loc: no visible global
     function definition for ‘axis’
    LRmixTK : analyse : analyse.loc : Dplot : Dplot.loc: no visible global
     function definition for ‘arrows’
    LRmixTK : analyse : analyse.loc : Dplot : Dplot.loc: no visible global
     function definition for ‘grid’
    LRmixTK : analyse : analyse.loc : Dplot : Dplot.loc: no visible global
     function definition for ‘title’
    LRmixTK : sampleProf : displayprofile: no visible global function
     definition for ‘read.table’
    LRmixTK : sampleProf : displayprofile: no visible global function
     definition for ‘read.csv’
    mastermix : <anonymous>: no visible global function definition for
     ‘help’
    naomitab: no visible global function definition for ‘na.omit’
    simMixSNP: no visible global function definition for ‘write.table’
    simPCR2: no visible global function definition for ‘rbinom’
    simPCR2TK : simPCR2TK.local : save : saveFile: no visible global
     function definition for ‘write.table’
    simPCR2TK : simPCR2TK.local : logis.frames : logi.regression: no
     visible global function definition for ‘glm’
    simPCR2TK : simPCR2TK.local : logis.frames : logi.regression: no
     visible binding for global variable ‘binomial’
    simPCR2TK : simPCR2TK.local : logis.frames : logi.regression : saveLog:
     no visible global function definition for ‘write.table’
    simPCR2TK : simPCR2TK.local : logis.frames : logi.regression :
     plotglm0: no visible global function definition for ‘par’
    simPCR2TK : simPCR2TK.local : logis.frames : logi.regression :
     plotglm0: no visible global function definition for ‘plot’
    simPCR2TK : simPCR2TK.local : logis.frames : logi.regression :
     plotglm0: no visible global function definition for ‘predict’
    simPCR2TK : simPCR2TK.local : logis.frames : logi.regression :
     plotglm0: no visible global function definition for ‘residuals’
    simPCR2TK : simPCR2TK.local : logis.frames : logi.regression :
     plotglm0: no visible global function definition for ‘abline’
    simPCR2TK : simPCR2TK.local : logis.frames : logi.regression :
     plotglm0: no visible global function definition for ‘title’
    simufreqD : rdirichlet: no visible global function definition for
     ‘rgamma’
    simufreqD: no visible global function definition for ‘na.omit’
    simupopD : rdirichlet: no visible global function definition for
     ‘rgamma’
    simupopD: no visible global function definition for ‘na.omit’
    wrapdataL: no visible global function definition for ‘read.table’
    wrapdataL: no visible global function definition for ‘plot’
    wrapdataL: no visible global function definition for ‘title’
    Undefined global functions or variables:
     abline arrows axis binomial ecdf glm grid help hist legend lines
     na.omit par plot points predict quantile rbinom read.csv read.table
     residuals rgamma rnorm runif title write.table
    Consider adding
     importFrom("graphics", "abline", "arrows", "axis", "grid", "hist",
     "legend", "lines", "par", "plot", "points", "title")
     importFrom("stats", "binomial", "ecdf", "glm", "na.omit", "predict",
     "quantile", "rbinom", "residuals", "rgamma", "rnorm",
     "runif")
     importFrom("utils", "help", "read.csv", "read.table", "write.table")
    to your NAMESPACE file.
Flavors: r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64