Last updated on 2020-08-07 01:50:19 CEST.
| Package | ERROR | OK |
|---|---|---|
| micompr | 2 | 10 |
Current CRAN status: ERROR: 2, OK: 10
Version: 1.1.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘biotools’
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64
Version: 1.1.0
Check: Rd cross-references
Result: NOTE
Package unavailable to check Rd xrefs: ‘biotools’
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64
Version: 1.1.0
Check: examples
Result: ERROR
Running examples in ‘micompr-Ex.R’ failed
The error most likely occurred in:
> ### Name: assumptions.cmpoutput
> ### Title: Get assumptions for parametric tests performed on output
> ### comparisons
> ### Aliases: assumptions.cmpoutput
>
> ### ** Examples
>
>
> # Create a cmpoutput object from the provided datasets
> cmp <- cmpoutput("All", 0.9, pphpc_ok$data[["All"]], pphpc_ok$obs_lvls)
>
> # Get the assumptions for the parametric tests performed in cmp
> acmp <- assumptions(cmp)
sROC 0.1-2 loaded
MANOVA assumptions require 'MVN' and 'biotools' packages.
Error in `*tmp*`[[i]] : subscript out of bounds
Calls: assumptions -> assumptions.cmpoutput
Execution halted
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64
Version: 1.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [11s/14s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
subscript out of bounds
Backtrace:
1. micompr::assumptions(mic1a)
2. micompr:::assumptions.micomp(mic1a)
3. base::lapply(obj, function(x) assumptions(x))
4. micompr:::FUN(X[[i]], ...)
6. micompr:::assumptions.cmpoutput(x)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 291 | SKIPPED: 0 | WARNINGS: 72 | FAILED: 2 ]
1. Error: assumptions.cmpoutput creates the correct object (@test_cmpoutput.R#214)
2. Error: micomp assumptions have the correct properties (@test_micomp.R#281)
Error: testthat unit tests failed
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.0
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘paper.Rnw’ using knitr
Quitting from lines 341-342 (paper.Rnw)
Error: processing vignette 'paper.Rnw' failed with diagnostics:
subscript out of bounds
--- failed re-building ‘paper.Rnw’
--- re-building ‘tolatex-examples.Rnw’ using knitr
Warning in wilcox.test.default(x = c(-2.17390550005803e-11, -2.17097451127302e-11, :
cannot compute exact p-value with ties
Warning in wilcox.test.default(x = c(2.13309370167281e-11, 2.12594386539422e-11, :
cannot compute exact p-value with ties
Warning in wilcox.test.default(x = c(1.99236183107132e-11, 1.97388771994156e-11, :
cannot compute exact p-value with ties
Warning in wilcox.test.default(x = c(1.00897068477934e-12, 1.02406971791424e-12, :
cannot compute exact p-value with ties
Warning in wilcox.test.default(x = c(8.95727936267576e-13, 8.4909856923332e-13, :
cannot compute exact p-value with ties
Warning in wilcox.test.default(x = c(9.80548975348938e-13, 8.81072992342524e-13, :
cannot compute exact p-value with ties
Warning in wilcox.test.default(x = c(5.90887339058099e-11, 6.09077233093558e-11, :
cannot compute exact p-value with ties
Warning in wilcox.test.default(x = c(9.97119053991469e-15, 9.92695509127728e-15, :
cannot compute exact p-value with ties
--- finished re-building ‘tolatex-examples.Rnw’
SUMMARY: processing the following file failed:
‘paper.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64
Version: 1.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [20s/46s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
subscript out of bounds
1: assumptions(mic1a) at testthat/test_micomp.R:281
2: assumptions.micomp(mic1a)
3: lapply(obj, function(x) assumptions(x))
4: FUN(X[[i]], ...)
5: assumptions(x)
6: assumptions.cmpoutput(x)
══ testthat results ═══════════════════════════════════════════════════════════
OK: 363 SKIPPED: 0 FAILED: 2
1. Error: assumptions.cmpoutput creates the correct object (@test_cmpoutput.R#214)
2. Error: micomp assumptions have the correct properties (@test_micomp.R#281)
Error: testthat unit tests failed
Execution halted
Flavor: r-oldrel-macos-x86_64