CRAN Package Check Results for Package corHMM

Last updated on 2020-08-07 01:49:39 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.2 17.49 723.98 741.47 WARN
r-devel-linux-x86_64-debian-gcc 2.3 13.58 287.86 301.44 OK
r-devel-linux-x86_64-fedora-clang 2.3 490.45 OK
r-devel-linux-x86_64-fedora-gcc 2.3 502.94 OK
r-devel-windows-ix86+x86_64 2.3 57.00 482.00 539.00 OK
r-patched-linux-x86_64 2.2 16.65 719.75 736.40 WARN
r-patched-solaris-x86 2.3 485.80 OK
r-release-linux-x86_64 2.2 15.45 718.78 734.23 WARN
r-release-macos-x86_64 2.2 OK
r-release-windows-ix86+x86_64 2.3 53.00 483.00 536.00 OK
r-oldrel-macos-x86_64 2.3 OK
r-oldrel-windows-ix86+x86_64 2.2 29.00 761.00 790.00 OK

Check Details

Version: 2.2
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building 'corHMMv2.1-vignette.Rmd' using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-1'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Loading required package: ape
    Loading required package: expm
    Loading required package: Matrix
    
    Attaching package: 'expm'
    
    The following object is masked from 'package:Matrix':
    
     expm
    
    The following object is masked from 'package:ape':
    
     balance
    
    Loading required package: corHMM
    Loading required package: nloptr
    Loading required package: GenSA
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-2'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-3'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-4'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-5'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-6'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-7'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-8'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-9'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-10'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-11'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-12'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-13'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-14'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-15'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-16'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-17'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-18'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-19'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-20'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-21'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-22'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-23'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-24'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-25'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-26'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-27'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-28'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-29'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-30'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-31'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-32'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-33'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-34'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-35'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-36'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-37'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-38'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-39'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Warning in block_exec(params) :
     Failed to tidy R code in chunk 'unnamed-chunk-40'. Reason:
    Error in loadNamespace(name) : there is no package called 'formatR'
    
    Killed
Flavors: r-devel-linux-x86_64-debian-clang, r-patched-linux-x86_64, r-release-linux-x86_64