CRAN Package Check Results for Package caroline

Last updated on 2020-08-07 01:49:37 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.7.6 5.52 32.58 38.10 NOTE
r-devel-linux-x86_64-debian-gcc 0.7.6 4.00 25.46 29.46 NOTE
r-devel-linux-x86_64-fedora-clang 0.7.6 52.21 NOTE
r-devel-linux-x86_64-fedora-gcc 0.7.6 43.62 NOTE
r-devel-windows-ix86+x86_64 0.7.6 10.00 48.00 58.00 NOTE
r-patched-linux-x86_64 0.7.6 5.53 33.13 38.66 NOTE
r-patched-solaris-x86 0.7.6 61.80 NOTE
r-release-linux-x86_64 0.7.6 5.41 32.61 38.02 NOTE
r-release-macos-x86_64 0.7.6 NOTE
r-release-windows-ix86+x86_64 0.7.6 12.00 50.00 62.00 NOTE
r-oldrel-macos-x86_64 0.7.6 NOTE
r-oldrel-windows-ix86+x86_64 0.7.6 7.00 45.00 52.00 NOTE

Check Details

Version: 0.7.6
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls in package code:
     'MASS' 'RSQLite' 'grid' 'sm'
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.7.6
Check: R code for possible problems
Result: NOTE
    .ci.median: no visible global function definition for 'qbinom'
    .ci.median: no visible global function definition for 'median'
    .ci.median: no visible global function definition for 'pbinom'
    .description: no visible global function definition for 'var'
    .description: no visible global function definition for 'shapiro.test'
    .description: no visible global function definition for 'quantile'
    .huber.NR: no visible global function definition for 'median'
    .kurtosis: no visible global function definition for 'var'
    .kurtosys: no visible global function definition for 'var'
    .mad: no visible global function definition for 'median'
    .rect3venn: no visible global function definition for 'plot.new'
    .rect3venn: no visible global function definition for 'plot.window'
    .rect3venn: no visible global function definition for 'rect'
    .rect3venn: no visible global function definition for 'text'
    .rrange: no visible global function definition for 'boxplot.stats'
    .skewed: no visible global function definition for 'var'
    bestBy: no visible global function definition for 'dbConnect'
    bestBy: no visible global function definition for 'dbDriver'
    bestBy: no visible global function definition for 'dbWriteTable'
    bestBy: no visible global function definition for 'dbGetQuery'
    dbWriteTable2: no visible global function definition for 'dbListFields'
    dbWriteTable2: no visible global function definition for 'dbGetQuery'
    dbWriteTable2: no visible global function definition for 'dbSendQuery'
    dbWriteTable2: no visible global function definition for 'dbColumnInfo'
    dbWriteTable2: no visible global function definition for
     'dbClearResult'
    dbWriteTable2: no visible global function definition for 'dbWriteTable'
    groupBy: no visible global function definition for 'dbConnect'
    groupBy: no visible global function definition for 'dbDriver'
    groupBy: no visible global function definition for 'dbWriteTable'
    groupBy: no visible global function definition for 'dbGetQuery'
    heatmatrix: no visible global function definition for 'image'
    heatmatrix: no visible global function definition for 'text'
    heatmatrix: no visible global function definition for 'par'
    hyperplot: no visible global function definition for 'png'
    hyperplot: no visible global function definition for 'par'
    hyperplot: no visible global function definition for 'dev.off'
    hyperplot: no visible global function definition for 'browseURL'
    labsegs: no visible global function definition for 'segments'
    leghead: no visible global function definition for 'head'
    leghead: no visible global function definition for 'rainbow'
    mvlabs: no visible global function definition for 'colors'
    mvlabs: no visible global function definition for 'identify'
    mvlabs: no visible global function definition for 'locator'
    mvlabs: no visible global function definition for 'text'
    parseArgString: no visible global function definition for 'as'
    pies: no visible global function definition for 'par'
    pies: no visible global function definition for 'rainbow'
    pies: no visible global function definition for 'plot.new'
    pies: no visible global function definition for 'plot.window'
    pies: no visible global function definition for 'polygon'
    pies: no visible global function definition for 'lines'
    pies: no visible global function definition for 'text'
    plotClock: no visible global function definition for 'polygon'
    plotClock: no visible global function definition for 'text'
    plotClock: no visible global function definition for 'segments'
    raAddArms: no visible global function definition for 'lines'
    raAddAxLabs: no visible global function definition for 'mtext'
    raAddSigLines: no visible global function definition for 'qnorm'
    raAddSigLines: no visible global function definition for 'lines'
    raPlot : u.epsilon: no visible global function definition for 'runif'
    raPlot: no visible global function definition for 'points'
    raPlot: no visible global function definition for 'segments'
    read.tab: no visible global function definition for 'read.delim'
    read.tab: no visible global function definition for 'count.fields'
    spie: no visible global function definition for 'rainbow'
    spie: no visible global function definition for 'grid.newpage'
    spie: no visible global function definition for 'pushViewport'
    spie: no visible global function definition for 'viewport'
    spie: no visible global function definition for 'grid.layout'
    spie: no visible global function definition for 'dataViewport'
    spie: no visible global function definition for 'grid.circle'
    spie: no visible global function definition for 'gpar'
    spie: no visible global function definition for 'grid.polygon'
    spie: no visible global function definition for 'grid.rect'
    spie: no visible global function definition for 'stringWidth'
    spie: no visible global function definition for 'stringHeight'
    spie: no visible global function definition for 'grid.text'
    spie: no visible global function definition for 'grid.lines'
    spie: no visible global function definition for 'unit'
    spie: no visible global function definition for 'upViewport'
    textplot: no visible global function definition for 'text'
    usr2lims: no visible global function definition for 'par'
    violins: no visible global function definition for 'quantile'
    violins: no visible global function definition for 'median'
    violins: no visible global function definition for 'sd'
    violins: no visible global function definition for 'plot.new'
    violins: no visible global function definition for 'plot.window'
    violins: no visible global function definition for 'axis'
    violins: no visible global function definition for 'title'
    violins: no visible global function definition for 'box'
    violins: no visible global function definition for 'polygon'
    violins: no visible global function definition for 'rect'
    violins: no visible global function definition for 'lines'
    violins: no visible global function definition for 'points'
    violins: no visible global function definition for 'segments'
    write.delim: no visible global function definition for 'write.table'
    Undefined global functions or variables:
     as axis box boxplot.stats browseURL colors count.fields dataViewport
     dbClearResult dbColumnInfo dbConnect dbDriver dbGetQuery dbListFields
     dbSendQuery dbWriteTable dev.off gpar grid.circle grid.layout
     grid.lines grid.newpage grid.polygon grid.rect grid.text head
     identify image lines locator median mtext par pbinom plot.new
     plot.window png points polygon pushViewport qbinom qnorm quantile
     rainbow read.delim rect runif sd segments shapiro.test stringHeight
     stringWidth text title unit upViewport var viewport write.table
    Consider adding
     importFrom("grDevices", "boxplot.stats", "colors", "dev.off", "png",
     "rainbow")
     importFrom("graphics", "axis", "box", "identify", "image", "lines",
     "locator", "mtext", "par", "plot.new", "plot.window",
     "points", "polygon", "rect", "segments", "text", "title")
     importFrom("methods", "as")
     importFrom("stats", "median", "pbinom", "qbinom", "qnorm", "quantile",
     "runif", "sd", "shapiro.test", "var")
     importFrom("utils", "browseURL", "count.fields", "head", "read.delim",
     "write.table")
    to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64

Version: 0.7.6
Check: for non-standard things in the check directory
Result: NOTE
    Found the following files/directories:
     'foo.tab'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.7.6
Check: Rd cross-references
Result: NOTE
    Undeclared packages ‘DBI’, ‘gplots’, ‘limma’ in Rd xrefs
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.7.6
Check: R code for possible problems
Result: NOTE
    .ci.median: no visible global function definition for ‘qbinom’
    .ci.median: no visible global function definition for ‘median’
    .ci.median: no visible global function definition for ‘pbinom’
    .description: no visible global function definition for ‘var’
    .description: no visible global function definition for ‘shapiro.test’
    .description: no visible global function definition for ‘quantile’
    .huber.NR: no visible global function definition for ‘median’
    .kurtosis: no visible global function definition for ‘var’
    .kurtosys: no visible global function definition for ‘var’
    .mad: no visible global function definition for ‘median’
    .rect3venn: no visible global function definition for ‘plot.new’
    .rect3venn: no visible global function definition for ‘plot.window’
    .rect3venn: no visible global function definition for ‘rect’
    .rect3venn: no visible global function definition for ‘text’
    .rrange: no visible global function definition for ‘boxplot.stats’
    .skewed: no visible global function definition for ‘var’
    bestBy: no visible global function definition for ‘dbConnect’
    bestBy: no visible global function definition for ‘dbDriver’
    bestBy: no visible global function definition for ‘dbWriteTable’
    bestBy: no visible global function definition for ‘dbGetQuery’
    dbWriteTable2: no visible global function definition for ‘dbListFields’
    dbWriteTable2: no visible global function definition for ‘dbGetQuery’
    dbWriteTable2: no visible global function definition for ‘dbSendQuery’
    dbWriteTable2: no visible global function definition for ‘dbColumnInfo’
    dbWriteTable2: no visible global function definition for
     ‘dbClearResult’
    dbWriteTable2: no visible global function definition for ‘dbWriteTable’
    groupBy: no visible global function definition for ‘dbConnect’
    groupBy: no visible global function definition for ‘dbDriver’
    groupBy: no visible global function definition for ‘dbWriteTable’
    groupBy: no visible global function definition for ‘dbGetQuery’
    heatmatrix: no visible global function definition for ‘image’
    heatmatrix: no visible global function definition for ‘text’
    heatmatrix: no visible global function definition for ‘par’
    hyperplot: no visible global function definition for ‘png’
    hyperplot: no visible global function definition for ‘plot’
    hyperplot: no visible global function definition for ‘par’
    hyperplot: no visible global function definition for ‘dev.off’
    hyperplot: no visible global function definition for ‘browseURL’
    labsegs: no visible global function definition for ‘segments’
    leghead: no visible global function definition for ‘head’
    leghead: no visible global function definition for ‘rainbow’
    mvlabs: no visible global function definition for ‘colors’
    mvlabs: no visible global function definition for ‘identify’
    mvlabs: no visible global function definition for ‘locator’
    mvlabs: no visible global function definition for ‘text’
    parseArgString: no visible global function definition for ‘as’
    pies: no visible global function definition for ‘par’
    pies: no visible global function definition for ‘plot’
    pies: no visible global function definition for ‘rainbow’
    pies: no visible global function definition for ‘plot.new’
    pies: no visible global function definition for ‘plot.window’
    pies: no visible global function definition for ‘polygon’
    pies: no visible global function definition for ‘lines’
    pies: no visible global function definition for ‘text’
    plotClock: no visible global function definition for ‘polygon’
    plotClock: no visible global function definition for ‘text’
    plotClock: no visible global function definition for ‘segments’
    raAddArms: no visible global function definition for ‘lines’
    raAddAxLabs: no visible global function definition for ‘mtext’
    raAddSigLines: no visible global function definition for ‘qnorm’
    raAddSigLines: no visible global function definition for ‘lines’
    raPlot : u.epsilon: no visible global function definition for ‘runif’
    raPlot: no visible global function definition for ‘points’
    raPlot: no visible global function definition for ‘segments’
    read.tab: no visible global function definition for ‘read.delim’
    read.tab: no visible global function definition for ‘count.fields’
    spie: no visible global function definition for ‘rainbow’
    spie: no visible global function definition for ‘grid.newpage’
    spie: no visible global function definition for ‘pushViewport’
    spie: no visible global function definition for ‘viewport’
    spie: no visible global function definition for ‘grid.layout’
    spie: no visible global function definition for ‘dataViewport’
    spie: no visible global function definition for ‘grid.circle’
    spie: no visible global function definition for ‘gpar’
    spie: no visible global function definition for ‘grid.polygon’
    spie: no visible global function definition for ‘grid.rect’
    spie: no visible global function definition for ‘stringWidth’
    spie: no visible global function definition for ‘stringHeight’
    spie: no visible global function definition for ‘grid.text’
    spie: no visible global function definition for ‘grid.lines’
    spie: no visible global function definition for ‘unit’
    spie: no visible global function definition for ‘upViewport’
    textplot: no visible global function definition for ‘plot’
    textplot: no visible global function definition for ‘text’
    usr2lims: no visible global function definition for ‘par’
    violins: no visible global function definition for ‘quantile’
    violins: no visible global function definition for ‘median’
    violins: no visible global function definition for ‘sd’
    violins: no visible global function definition for ‘plot.new’
    violins: no visible global function definition for ‘plot.window’
    violins: no visible global function definition for ‘axis’
    violins: no visible global function definition for ‘title’
    violins: no visible global function definition for ‘box’
    violins: no visible global function definition for ‘polygon’
    violins: no visible global function definition for ‘rect’
    violins: no visible global function definition for ‘lines’
    violins: no visible global function definition for ‘points’
    violins: no visible global function definition for ‘segments’
    write.delim: no visible global function definition for ‘write.table’
    Undefined global functions or variables:
     as axis box boxplot.stats browseURL colors count.fields dataViewport
     dbClearResult dbColumnInfo dbConnect dbDriver dbGetQuery dbListFields
     dbSendQuery dbWriteTable dev.off gpar grid.circle grid.layout
     grid.lines grid.newpage grid.polygon grid.rect grid.text head
     identify image lines locator median mtext par pbinom plot plot.new
     plot.window png points polygon pushViewport qbinom qnorm quantile
     rainbow read.delim rect runif sd segments shapiro.test stringHeight
     stringWidth text title unit upViewport var viewport write.table
    Consider adding
     importFrom("grDevices", "boxplot.stats", "colors", "dev.off", "png",
     "rainbow")
     importFrom("graphics", "axis", "box", "identify", "image", "lines",
     "locator", "mtext", "par", "plot", "plot.new",
     "plot.window", "points", "polygon", "rect", "segments",
     "text", "title")
     importFrom("methods", "as")
     importFrom("stats", "median", "pbinom", "qbinom", "qnorm", "quantile",
     "runif", "sd", "shapiro.test", "var")
     importFrom("utils", "browseURL", "count.fields", "head", "read.delim",
     "write.table")
    to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.7.6
Check: Rd cross-references
Result: NOTE
    Package unavailable to check Rd xrefs: ‘limma’
Flavor: r-oldrel-macos-x86_64