CRAN Package Check Results for Maintainer Graham Derryberry <asterion at alum.mit.edu>

CRAN Package Check Results for Maintainer ‘Graham Derryberry <asterion at alum.mit.edu>’

Last updated on 2020-08-07 01:50:13 CEST.

Package	NOTE
hzar	12

Package hzar

Current CRAN status:

Version: 0.2-5
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     'MCMCpack' 'coda' 'foreach'
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.2-5
Check: R code for possible problems
Result: NOTE
    appThetaWalkerR: no visible global function definition for 'runif'
    fitter.gen.rParam.uniform: no visible global function definition for
     '%do%'
    fitter.gen.rParam.uniform: no visible global function definition for
     'foreach'
    fitter.gen.rParam.uniform: no visible global function definition for
     'runif'
    g.sMuVarL: no visible global function definition for 'var'
    g.sMuVarR: no visible global function definition for 'var'
    hzar.chain.doSeq: no visible global function definition for 'mcmc'
    hzar.chain.doSeq: no visible global function definition for 'thin'
    hzar.cov.rect: no visible binding for global variable 'extendrange'
    hzar.cov.rect: no visible global function definition for 'cov.wt'
    hzar.dataGroup.null: no visible global function definition for 'mcmc'
    hzar.doCLTData1DPops: no visible global function definition for
     'quantile'
    hzar.doCLTData1DPops: no visible global function definition for
     'na.omit'
    hzar.doCLTData1DRaw : <anonymous>: no visible global function
     definition for 'var'
    hzar.doCLTData1DRaw: no visible global function definition for
     'quantile'
    hzar.doChain.multi: no visible global function definition for '%dopar%'
    hzar.doChain.multi: no visible global function definition for 'foreach'
    hzar.doChain.multi: no visible global function definition for '%do%'
    hzar.doFit: no visible global function definition for 'MCMCmetrop1R'
    hzar.doFit.multi: no visible global function definition for '%dopar%'
    hzar.doFit.multi: no visible global function definition for 'foreach'
    hzar.doFit.multi: no visible global function definition for '%do%'
    hzar.doMolecularData1DPops: no visible global function definition for
     'extendrange'
    hzar.doMolecularData1DPops: no visible global function definition for
     'na.omit'
    hzar.doNormalData1DPops: no visible global function definition for
     'na.omit'
    hzar.doNormalData1DPops: no visible global function definition for
     'extendrange'
    hzar.doNormalData1DRaw : <anonymous>: no visible global function
     definition for 'na.omit'
    hzar.doNormalData1DRaw: no visible binding for global variable 'var'
    hzar.doNormalData1DRaw: no visible global function definition for
     'extendrange'
    hzar.doNormalData1DRaw: no visible global function definition for
     'na.omit'
    hzar.eval.clineLL: no visible global function definition for '%dopar%'
    hzar.eval.clineLL: no visible global function definition for 'foreach'
    hzar.eval.clineLL: no visible global function definition for '%do%'
    hzar.fit2DataGroup: no visible global function definition for 'mcmc'
    hzar.mcmc.bindLL: no visible global function definition for 'mcmc'
    hzar.mcmc.bindLL: no visible global function definition for 'as.mcmc'
    hzar.mcmc.bindLL: no visible global function definition for 'start'
    hzar.mcmc.bindLL: no visible global function definition for 'thin'
    hzar.next.fitRequest: no visible global function definition for
     'cov.wt'
    hzar.plot.cline: no visible global function definition for 'curve'
    hzar.plot.fzCline: no visible global function definition for 'par'
    hzar.plot.fzCline: no visible global function definition for 'polygon'
    hzar.plot.fzCline: no visible global function definition for 'lines'
    hzar.plot.obsData: no visible global function definition for 'points'
    hzar.profile.dataGroup: no visible global function definition for
     'median'
    hzar.profile.dataGroup: no visible global function definition for
     'equal.count'
    hzar.profile.dataGroup: no visible global function definition for
     'foreach'
    hzar.profile.dataGroup: no visible global function definition for
     '%dopar%'
    hzar.profile.dataGroup: no visible global function definition for
     '%do%'
    logLikeCLTEstPopMean: no visible global function definition for 'dt'
    obs.g.summary: no visible global function definition for 'na.omit'
    obs.g.summary: no visible global function definition for 'extendrange'
    optimizeTrace: no visible global function definition for 'as.mcmc'
    profile.fitRequest: no visible global function definition for 'cov.wt'
    setupCLTCenterClineParameters: no visible global function definition
     for 'quantile'
    setupMoleCenterClineParameters: no visible global function definition
     for 'quantile'
    Undefined global functions or variables:
     %do% %dopar% MCMCmetrop1R as.mcmc cov.wt curve dt equal.count
     extendrange foreach lines mcmc median na.omit par points polygon
     quantile runif start thin var
    Consider adding
     importFrom("grDevices", "extendrange")
     importFrom("graphics", "curve", "lines", "par", "points", "polygon")
     importFrom("stats", "cov.wt", "dt", "median", "na.omit", "quantile",
     "runif", "start", "var")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64

Version: 0.2-5
Check: R code for possible problems
Result: NOTE
    appThetaWalkerR: no visible global function definition for ‘runif’
    fitter.gen.rParam.uniform: no visible global function definition for
     ‘%do%’
    fitter.gen.rParam.uniform: no visible global function definition for
     ‘foreach’
    fitter.gen.rParam.uniform: no visible global function definition for
     ‘runif’
    g.sMuVarL: no visible global function definition for ‘var’
    g.sMuVarR: no visible global function definition for ‘var’
    hzar.chain.doSeq: no visible global function definition for ‘mcmc’
    hzar.chain.doSeq: no visible global function definition for ‘thin’
    hzar.cov.rect: no visible binding for global variable ‘extendrange’
    hzar.cov.rect: no visible global function definition for ‘cov.wt’
    hzar.dataGroup.null: no visible global function definition for ‘mcmc’
    hzar.doCLTData1DPops: no visible global function definition for
     ‘quantile’
    hzar.doCLTData1DPops: no visible global function definition for
     ‘na.omit’
    hzar.doCLTData1DRaw : <anonymous>: no visible global function
     definition for ‘var’
    hzar.doCLTData1DRaw: no visible global function definition for
     ‘quantile’
    hzar.doChain.multi: no visible global function definition for ‘%dopar%’
    hzar.doChain.multi: no visible global function definition for ‘foreach’
    hzar.doChain.multi: no visible global function definition for ‘%do%’
    hzar.doFit: no visible global function definition for ‘MCMCmetrop1R’
    hzar.doFit.multi: no visible global function definition for ‘%dopar%’
    hzar.doFit.multi: no visible global function definition for ‘foreach’
    hzar.doFit.multi: no visible global function definition for ‘%do%’
    hzar.doMolecularData1DPops: no visible global function definition for
     ‘extendrange’
    hzar.doMolecularData1DPops: no visible global function definition for
     ‘na.omit’
    hzar.doNormalData1DPops: no visible global function definition for
     ‘na.omit’
    hzar.doNormalData1DPops: no visible global function definition for
     ‘extendrange’
    hzar.doNormalData1DRaw : <anonymous>: no visible global function
     definition for ‘na.omit’
    hzar.doNormalData1DRaw: no visible binding for global variable ‘var’
    hzar.doNormalData1DRaw: no visible global function definition for
     ‘extendrange’
    hzar.doNormalData1DRaw: no visible global function definition for
     ‘na.omit’
    hzar.eval.clineLL: no visible global function definition for ‘%dopar%’
    hzar.eval.clineLL: no visible global function definition for ‘foreach’
    hzar.eval.clineLL: no visible global function definition for ‘%do%’
    hzar.fit2DataGroup: no visible global function definition for ‘mcmc’
    hzar.mcmc.bindLL: no visible global function definition for ‘mcmc’
    hzar.mcmc.bindLL: no visible global function definition for ‘as.mcmc’
    hzar.mcmc.bindLL: no visible global function definition for ‘start’
    hzar.mcmc.bindLL: no visible global function definition for ‘thin’
    hzar.next.fitRequest: no visible global function definition for
     ‘cov.wt’
    hzar.plot.cline: no visible global function definition for ‘curve’
    hzar.plot.fzCline: no visible global function definition for ‘par’
    hzar.plot.fzCline: no visible global function definition for ‘polygon’
    hzar.plot.fzCline: no visible global function definition for ‘lines’
    hzar.plot.obsData: no visible global function definition for ‘points’
    hzar.plot.obsData: no visible global function definition for ‘plot’
    hzar.profile.dataGroup: no visible global function definition for
     ‘median’
    hzar.profile.dataGroup: no visible global function definition for
     ‘equal.count’
    hzar.profile.dataGroup: no visible global function definition for
     ‘foreach’
    hzar.profile.dataGroup: no visible global function definition for
     ‘%dopar%’
    hzar.profile.dataGroup: no visible global function definition for
     ‘%do%’
    logLikeCLTEstPopMean: no visible global function definition for ‘dt’
    obs.g.summary: no visible global function definition for ‘na.omit’
    obs.g.summary: no visible global function definition for ‘extendrange’
    optimizeTrace: no visible global function definition for ‘as.mcmc’
    profile.fitRequest: no visible global function definition for ‘cov.wt’
    setupCLTCenterClineParameters: no visible global function definition
     for ‘quantile’
    setupMoleCenterClineParameters: no visible global function definition
     for ‘quantile’
    Undefined global functions or variables:
     %do% %dopar% MCMCmetrop1R as.mcmc cov.wt curve dt equal.count
     extendrange foreach lines mcmc median na.omit par plot points polygon
     quantile runif start thin var
    Consider adding
     importFrom("grDevices", "extendrange")
     importFrom("graphics", "curve", "lines", "par", "plot", "points",
     "polygon")
     importFrom("stats", "cov.wt", "dt", "median", "na.omit", "quantile",
     "runif", "start", "var")
    to your NAMESPACE file.
Flavors: r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64