CRAN Package Check Results for Package LPS

Last updated on 2020-08-07 01:49:51 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.10 3.50 40.13 43.63 NOTE
r-devel-linux-x86_64-debian-gcc 1.0.10 2.67 29.93 32.60 NOTE
r-devel-linux-x86_64-fedora-clang 1.0.10 59.65 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0.10 49.17 NOTE
r-devel-windows-ix86+x86_64 1.0.10 9.00 68.00 77.00 NOTE
r-patched-linux-x86_64 1.0.10 3.21 39.67 42.88 NOTE
r-patched-solaris-x86 1.0.10 72.20 NOTE
r-release-linux-x86_64 1.0.10 3.57 38.45 42.02 NOTE
r-release-macos-x86_64 1.0.10 NOTE
r-release-windows-ix86+x86_64 1.0.10 7.00 45.00 52.00 NOTE
r-oldrel-macos-x86_64 1.0.10 NOTE
r-oldrel-windows-ix86+x86_64 1.0.10 6.00 71.00 77.00 NOTE

Check Details

Version: 1.0.10
Check: R code for possible problems
Result: NOTE
    LPS: no visible global function definition for 'update.formula'
    LPS: no visible global function definition for 'model.frame'
    LPS: no visible binding for global variable 'sd'
    LPS.coeff: no visible global function definition for 'is'
    LPS.coeff: no visible global function definition for 'model.frame'
    LPS.coeff: no visible global function definition for 'terms'
    LPS.coeff: no visible binding for global variable 'var'
    LPS.coeff: no visible global function definition for 'pt'
    LPS.k.form: no visible global function definition for 'head'
    LPS.k.form: no visible global function definition for 'as.formula'
    LPS.p.form: no visible global function definition for 'p.adjust'
    LPS.p.form: no visible global function definition for 'as.formula'
    OVL: no visible global function definition for 'qnorm'
    OVL: no visible global function definition for 'dnorm'
    clusterize: no visible global function definition for 'lcm'
    clusterize: no visible binding for global variable 'median'
    clusterize: no visible binding for global variable 'mad'
    clusterize: no visible binding for global variable 'sd'
    clusterize: no visible global function definition for 'as.dendrogram'
    clusterize: no visible global function definition for 'layout'
    clusterize: no visible global function definition for 'par'
    clusterize: no visible global function definition for 'legend'
    dist.COR: no visible global function definition for 'cor'
    hclust.ward: no visible global function definition for 'hclust'
    heat: no visible global function definition for 'col2rgb'
    heat: no visible global function definition for 'rgb'
    heat.map: no visible global function definition for 'lcm'
    heat.map: no visible global function definition for 'rainbow'
    heat.map: no visible global function definition for 'layout'
    heat.map: no visible binding for global variable 'median'
    heat.map: no visible binding for global variable 'mad'
    heat.map: no visible binding for global variable 'sd'
    heat.map: no visible global function definition for 'strwidth'
    heat.map: no visible global function definition for 'par'
    heat.map: no visible global function definition for 'rect'
    heat.map: no visible global function definition for 'mtext'
    heat.map: no visible global function definition for 'image'
    heat.map: no visible global function definition for 'axis'
    heat.map: no visible global function definition for 'box'
    heat.scale: no visible global function definition for 'par'
    heat.scale: no visible global function definition for 'rect'
    heat.scale: no visible global function definition for 'head'
    heat.scale: no visible global function definition for 'tail'
    heat.scale: no visible global function definition for 'box'
    heat.scale: no visible global function definition for 'axis'
    heat.scale: no visible global function definition for 'mtext'
    plot.LPS: no visible global function definition for 'dnorm'
    plot.LPS: no visible global function definition for 'predict'
    plot.LPS: no visible global function definition for 'par'
    plot.LPS: no visible global function definition for 'abline'
    plot.LPS: no visible global function definition for 'tail'
    plot.LPS: no visible global function definition for 'head'
    plot.LPS: no visible global function definition for 'rect'
    plot.LPS: no visible global function definition for 'mtext'
    plot.LPS: no visible global function definition for 'points'
    plot.LPS: no visible global function definition for 'axis'
    plot.LPS: no visible global function definition for 'legend'
    predict.LPS: no visible global function definition for 'lcm'
    predict.LPS: no visible global function definition for 'dnorm'
    predict.LPS: no visible global function definition for 'layout'
    predict.LPS: no visible global function definition for 'axis'
    predict.LPS: no visible global function definition for 'head'
    predict.LPS: no visible global function definition for 'tail'
    predict.LPS: no visible global function definition for 'abline'
    predict.LPS: no visible global function definition for 'box'
    predict.LPS: no visible global function definition for 'par'
    predict.LPS: no visible global function definition for 'legend'
    predict.LPS: no visible global function definition for 'rect'
    predict.LPS: no visible global function definition for 'text'
    rain: no visible global function definition for 'rainbow'
    surv.colors: no visible global function definition for 'rgb'
    surv.colors: no visible global function definition for 'colorRamp'
    surv.scale: no visible global function definition for 'layout'
    surv.scale: no visible global function definition for 'par'
    surv.scale: no visible global function definition for 'rect'
    surv.scale: no visible global function definition for 'rgb'
    surv.scale: no visible global function definition for 'colorRamp'
    surv.scale: no visible global function definition for 'axis'
    surv.scale: no visible global function definition for 'mtext'
    surv.scale: no visible global function definition for 'box'
    var.formula: no visible global function definition for 'is'
    Undefined global functions or variables:
     abline as.dendrogram as.formula axis box col2rgb colorRamp cor dnorm
     hclust head image is layout lcm legend mad median model.frame mtext
     p.adjust par points predict pt qnorm rainbow rect rgb sd strwidth
     tail terms text update.formula var
    Consider adding
     importFrom("grDevices", "col2rgb", "colorRamp", "rainbow", "rgb")
     importFrom("graphics", "abline", "axis", "box", "image", "layout",
     "lcm", "legend", "mtext", "par", "points", "rect",
     "strwidth", "text")
     importFrom("methods", "is")
     importFrom("stats", "as.dendrogram", "as.formula", "cor", "dnorm",
     "hclust", "mad", "median", "model.frame", "p.adjust",
     "predict", "pt", "qnorm", "sd", "terms", "update.formula",
     "var")
     importFrom("utils", "head", "tail")
    to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64

Version: 1.0.10
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘limma’
Flavor: r-oldrel-macos-x86_64

Version: 1.0.10
Check: R code for possible problems
Result: NOTE
    LPS: no visible global function definition for ‘update.formula’
    LPS: no visible global function definition for ‘model.frame’
    LPS: no visible binding for global variable ‘sd’
    LPS.coeff: no visible global function definition for ‘is’
    LPS.coeff: no visible global function definition for ‘model.frame’
    LPS.coeff: no visible global function definition for ‘terms’
    LPS.coeff: no visible binding for global variable ‘var’
    LPS.coeff: no visible global function definition for ‘pt’
    LPS.k.form: no visible global function definition for ‘head’
    LPS.k.form: no visible global function definition for ‘as.formula’
    LPS.p.form: no visible global function definition for ‘p.adjust’
    LPS.p.form: no visible global function definition for ‘as.formula’
    OVL: no visible global function definition for ‘qnorm’
    OVL: no visible global function definition for ‘dnorm’
    clusterize: no visible global function definition for ‘lcm’
    clusterize: no visible binding for global variable ‘median’
    clusterize: no visible binding for global variable ‘mad’
    clusterize: no visible binding for global variable ‘sd’
    clusterize: no visible global function definition for ‘as.dendrogram’
    clusterize: no visible global function definition for ‘layout’
    clusterize: no visible global function definition for ‘par’
    clusterize: no visible global function definition for ‘legend’
    dist.COR: no visible global function definition for ‘cor’
    hclust.ward: no visible global function definition for ‘hclust’
    heat: no visible global function definition for ‘col2rgb’
    heat: no visible global function definition for ‘rgb’
    heat.map: no visible global function definition for ‘lcm’
    heat.map: no visible global function definition for ‘rainbow’
    heat.map: no visible global function definition for ‘layout’
    heat.map: no visible binding for global variable ‘median’
    heat.map: no visible binding for global variable ‘mad’
    heat.map: no visible binding for global variable ‘sd’
    heat.map: no visible global function definition for ‘strwidth’
    heat.map: no visible global function definition for ‘par’
    heat.map: no visible global function definition for ‘plot’
    heat.map: no visible global function definition for ‘rect’
    heat.map: no visible global function definition for ‘mtext’
    heat.map: no visible global function definition for ‘image’
    heat.map: no visible global function definition for ‘axis’
    heat.map: no visible global function definition for ‘box’
    heat.scale: no visible global function definition for ‘par’
    heat.scale: no visible global function definition for ‘plot’
    heat.scale: no visible global function definition for ‘rect’
    heat.scale: no visible global function definition for ‘head’
    heat.scale: no visible global function definition for ‘tail’
    heat.scale: no visible global function definition for ‘box’
    heat.scale: no visible global function definition for ‘axis’
    heat.scale: no visible global function definition for ‘mtext’
    plot.LPS: no visible global function definition for ‘dnorm’
    plot.LPS: no visible global function definition for ‘predict’
    plot.LPS: no visible global function definition for ‘plot’
    plot.LPS: no visible global function definition for ‘par’
    plot.LPS: no visible global function definition for ‘abline’
    plot.LPS: no visible global function definition for ‘tail’
    plot.LPS: no visible global function definition for ‘head’
    plot.LPS: no visible global function definition for ‘rect’
    plot.LPS: no visible global function definition for ‘mtext’
    plot.LPS: no visible global function definition for ‘points’
    plot.LPS: no visible global function definition for ‘axis’
    plot.LPS: no visible global function definition for ‘legend’
    predict.LPS: no visible global function definition for ‘lcm’
    predict.LPS: no visible global function definition for ‘dnorm’
    predict.LPS: no visible global function definition for ‘layout’
    predict.LPS: no visible global function definition for ‘axis’
    predict.LPS: no visible global function definition for ‘head’
    predict.LPS: no visible global function definition for ‘tail’
    predict.LPS: no visible global function definition for ‘abline’
    predict.LPS: no visible global function definition for ‘box’
    predict.LPS: no visible global function definition for ‘par’
    predict.LPS: no visible global function definition for ‘legend’
    predict.LPS: no visible global function definition for ‘rect’
    predict.LPS: no visible global function definition for ‘text’
    rain: no visible global function definition for ‘rainbow’
    surv.colors: no visible global function definition for ‘rgb’
    surv.colors: no visible global function definition for ‘colorRamp’
    surv.scale: no visible global function definition for ‘layout’
    surv.scale: no visible global function definition for ‘par’
    surv.scale: no visible global function definition for ‘plot’
    surv.scale: no visible global function definition for ‘rect’
    surv.scale: no visible global function definition for ‘rgb’
    surv.scale: no visible global function definition for ‘colorRamp’
    surv.scale: no visible global function definition for ‘axis’
    surv.scale: no visible global function definition for ‘mtext’
    surv.scale: no visible global function definition for ‘box’
    var.formula: no visible global function definition for ‘is’
    Undefined global functions or variables:
     abline as.dendrogram as.formula axis box col2rgb colorRamp cor dnorm
     hclust head image is layout lcm legend mad median model.frame mtext
     p.adjust par plot points predict pt qnorm rainbow rect rgb sd
     strwidth tail terms text update.formula var
    Consider adding
     importFrom("grDevices", "col2rgb", "colorRamp", "rainbow", "rgb")
     importFrom("graphics", "abline", "axis", "box", "image", "layout",
     "lcm", "legend", "mtext", "par", "plot", "points", "rect",
     "strwidth", "text")
     importFrom("methods", "is")
     importFrom("stats", "as.dendrogram", "as.formula", "cor", "dnorm",
     "hclust", "mad", "median", "model.frame", "p.adjust",
     "predict", "pt", "qnorm", "sd", "terms", "update.formula",
     "var")
     importFrom("utils", "head", "tail")
    to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64