absorbance_to_transmittance	absorbance_to_transmittance
aggregate_samples	aggregate_samples
aov_all_vars	aov_all_vars
apply_by_group	apply_by_group
apply_by_groups	apply_by_groups
apply_by_sample	apply_by_sample
apply_by_variable	apply_by_variable
background_correction	background_correction
baseline_correction	baseline_correction
boxplot_variables	boxplot_variables
boxplot_vars_factor	boxplot_vars_factor
cachexia	cachexia
check_dataset	check_dataset
clustering	clustering
compare_regions_by_sample	compare_regions_by_sample
convert_chebi_to_kegg	convert_chebi_to_kegg
convert_from_chemospec	convert_from_chemospec
convert_from_hyperspec	convert_from_hyperspec
convert_hmdb_to_kegg	convert_hmdb_to_kegg
convert_keggpathway_2_reactiongraph	convert_keggpathway_2_reactiongraph
convert_multiple_spcmnm_to_kegg	convert_multiple_spcmnm_to_kegg
convert_to_factor	convert_to_factor
convert_to_hyperspec	convert_to_hyperspec
correlations_dataset	correlations_dataset
correlations_test	correlations_test
correlation_test	correlation_test
count_missing_values	count_missing_values
count_missing_values_per_sample	count_missing_values_per_sample
count_missing_values_per_variable	count_missing_values_per_variable
create_dataset	create_dataset
create_pathway_with_reactions	create_pathway_with_reactions
cubic_root_transform	cubic_root_transform
dataset_from_peaks	dataset_from_peaks
data_correction	data_correction
dendrogram_plot	dendrogram_plot
dendrogram_plot_col	dendrogram_plot_col
detect_nmr_peaks_from_dataset	detect_nmr_peaks_from_dataset
feature_selection	feature_selection
filter_feature_selection	filter_feature_selection
find_equal_samples	find_equal_samples
first_derivative	first_derivative
flat_pattern_filter	flat_pattern_filter
fold_change	fold_change
fold_change_var	fold_change_var
get_cpd_names	get_cpd_names
get_data	get_data
get_data_as_df	get_data_as_df
get_data_value	get_data_value
get_data_values	get_data_values
get_files_list_per_assay	get_files_list_assay
get_metabolights_study	get_metabolights_study
get_metabolights_study_files_assay	get_metabolights_study_files_assay
get_metabolights_study_metadata_assay	get_metabolights_study_metadata_assay
get_metabolights_study_samples_files	get_metabolights_study_samples_files
get_MetabolitePath	get_MetabolitePath
get_metabPaths_org	get_metabPaths_org
get_metadata	get_metadata
get_metadata_value	get_metadata_value
get_metadata_var	get_metadata_var
get_OrganismsCodes	get_OrganismsCodes
get_paths_with_cpds_org	get_paths_with_cpds_org
get_peak_values	get_peak_values
get_samples_names_dx	get_samples_names_dx
get_samples_names_spc	get_samples_names_spc
get_sample_names	get_sample_names
get_type	get_type
get_value_label	get_value_label
get_x_label	get_x_label
get_x_values_as_num	get_x_values_as_num
get_x_values_as_text	get_x_values_as_text
group_peaks	group_peaks
heatmap_correlations	heatmap_correlations
hierarchical_clustering	hierarchical_clustering
impute_nas_knn	impute_nas_knn
impute_nas_linapprox	impute_nas_linapprox
impute_nas_mean	impute_nas_mean
impute_nas_median	impute_nas_median
impute_nas_value	impute_nas_value
indexes_to_xvalue_interval	indexes_to_xvalue_interval
is_spectra	is_spectra
kmeans_clustering	kmeans_clustering
kmeans_plot	kmeans_plot
kmeans_result_df	kmeans_result_df
kruskalTest_dataset	kruskalTest_dataset
ksTest_dataset	ksTest_dataset
linregression_onevar	linregression_onevar
linreg_all_vars	linreg_all_vars
linreg_coef_table	linreg_coef_table
linreg_pvalue_table	linreg_pvalue_table
linreg_rsquared	linreg_rsquared
log_transform	log_transform
low_level_fusion	low_level_fusion
MAIT_identify_metabolites	MAIT_identify_metabolites
mean_centering	mean_centering
merge_datasets	merge_datasets
merge_data_metadata	merge_data_metadata
metabolights_studies_list	metabolights_studies_list
metadata_as_variables	metadata_as_variables
missingvalues_imputation	missingvalues_imputation
msc_correction	msc_correction
multiClassSummary	multiClassSummary
multifactor_aov_all_vars	multifactor_aov_all_vars
multifactor_aov_pvalues_table	multifactor_aov_pvalues_table
multifactor_aov_varexp_table	multifactor_aov_varexp_table
multiplot	multiplot
nmr_identification	nmr_identification
normalize	normalize
normalize_samples	normalize_samples
num_samples	num_samples
num_x_values	num_x_values
offset_correction	offset_correction
pathway_analysis	pathway_analysis
pca_analysis_dataset	pca_analysis_dataset
pca_biplot	pca_biplot
pca_biplot3D	pca_biplot3D
pca_importance	pca_importance
pca_kmeans_plot2D	pca_kmeans_plot2D
pca_kmeans_plot3D	pca_kmeans_plot3D
pca_pairs_kmeans_plot	pca_pairs_kmeans_plot
pca_pairs_plot	pca_pairs_plot
pca_plot_3d	pca_plot_3d
pca_robust	pca_robust
pca_scoresplot2D	pca_scoresplot2D
pca_scoresplot3D	pca_scoresplot3D
pca_scoresplot3D_rgl	pca_scoresplot3D_rgl
pca_screeplot	pca_screeplot
peaks_per_sample	peaks_per_sample
peaks_per_samples	peaks_per_samples
plotvar_twofactor	plotvar_twofactor
plot_anova	plot_anova
plot_fold_change	plot_fold_change
plot_kruskaltest	plot_kruskaltest
plot_kstest	plot_kstest
plot_peaks	plot_peaks
plot_regression_coefs_pvalues	plot_regression_coefs_pvalues
plot_spectra	plot_spectra
plot_spectra_simple	plot_spectra_simple
plot_ttests	plot_ttests
predict_samples	predict_samples
propolis	propolis
propolisSampleList	propolisSampleList
read_Bruker_files	read_Bruker_files
read_csvs_folder	read_csvs_folder
read_dataset_csv	read_dataset_csv
read_dataset_dx	read_dataset_dx
read_dataset_spc	read_dataset_spc
read_data_csv	read_data_csv
read_data_dx	read_data_dx
read_data_spc	read_data_spc
read_metadata	read_metadata
read_ms_spectra	read_ms_spectra
read_multiple_csvs	read_multiple_csvs
read_spc_nosubhdr	read-spc
read_varian_spectra_raw	read_varian_spectra_raw
recursive_feature_elimination	recursive_feature_elimination
remove_data	remove_data
remove_data_variables	remove_data_variables
remove_metadata_variables	remove_metadata_variables
remove_peaks_interval	remove_peaks_interval
remove_peaks_interval_sample_list	remove_peaks_interval_sample_list
remove_samples	remove_samples
remove_samples_by_nas	remove_samples_by_nas
remove_samples_by_na_metadata	remove_samples_by_na_metadata
remove_variables_by_nas	remove_variables_by_nas
remove_x_values_by_interval	remove_x_values_by_interval
replace_data_value	replace_data_value
replace_metadata_value	replace_metadata_value
savitzky_golay	savitzky_golay
scaling	scaling
scaling_samples	scaling_samples
set_metadata	set_metadata
set_sample_names	set_sample_names
set_value_label	set_value_label
set_x_label	set_x_label
set_x_values	set_x_values
shift_correction	shift_correction
smoothing_interpolation	smoothing_interpolation
snv_dataset	snv_dataset
spectra_options	spectra_options
stats_by_sample	stats_by_sample
stats_by_variable	stats_by_variable
subset_by_samples_and_xvalues	subset_by_samples_and_xvalues
subset_metadata	subset_metadata
subset_random_samples	subset_random_samples
subset_samples	subset_samples
subset_samples_by_metadata_values	subset_samples_by_metadata_values
subset_x_values	subset_x_values
subset_x_values_by_interval	subset_x_values_by_interval
summary_var_importance	summary_var_importance
sum_dataset	sum_dataset
train_and_predict	train_and_predict
train_classifier	train_classifier
train_models_performance	train_models_performance
transform_data	transform_data
transmittance_to_absorbance	transmittance_to_absorbance
tTests_dataset	tTests_dataset
values_per_peak	values_per_peak
values_per_sample	values_per_sample
variables_as_metadata	variables_as_metadata
volcano_plot_fc_tt	volcano_plot_fc_tt
xvalue_interval_to_indexes	xvalue_interval_to_indexes
x_values_to_indexes	x_values_to_indexes
