# Handling of Data from the Clinical Data Management System 'secuTrial'

## Documentation for package ‘secuTrialR’ version 1.0.3

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

annual_recruitment | Returns a data.frame showing the annual recruitment per center
as.data.frame.secuTrialdata | as.data.frame method for secuTrialdata objects Make the data from the exports more easily accessible by placing them in another environment (e.g. place them in the global environment ('.GlobalEnv') and you can reference them without referring to the 'secuTrialdata' object anymore. Ie. they become regular 'data.frame's).
assess_form_variable_completeness | Asses completeness of data for each variable in a secuTrial export
build_secuTrial_url | Compose a secuTrial URL
check_export_options | Returns deviations from suggested export options
dates_secuTrial | Methods to handle date(times)s in secuTrial exports
dates_secuTrial.secuTrialdata | Methods to handle date(times)s in secuTrial exports
diff_secuTrial | Returns differences in the setup of two 'secuTrialdata' objects
factorize | Add factors to 'secuTrialdata' objects
factorize_secuTrial | Add factors to 'secuTrialdata' objects
factorize_secuTrial.secuTrialdata | Add factors to 'secuTrialdata' objects
form_status_counts | A function to assess the status of forms
form_status_summary | A function to show summary statistics for form statuses
get_participants | Retrieves participants present in 'secuTrialdata'
label | Get variable labels for secuTrialdata objects
label<- | Get variable labels for secuTrialdata objects
labels_secuTrial | Get variable labels for secuTrialdata objects
label_secuTrial | Get variable labels for secuTrialdata objects
links_secuTrial | Show links between forms
plot.secuTrialvisit | Get the visit structure of 'secuTrialdata' objects
plot_recruitment | Plots the recruitment over time for 'secuTrialdata' objects
print.secuTrialdata | This function loads a secuTrial export
read_secuTrial | Read secuTrial export
read_secuTrial_raw | This function loads a secuTrial export
read_validation_overview | This function loads a multi-page secuTrial 'Validation Overview' report into an R tibble.
return_hidden_items | Returns hidden items (variables) from 'secuTrialdata' objects
return_random_participants | Returns the random participants from a secuTrial export
return_scores | Returns the score (calculated) items from 'secuTrialdata' objects
secuTrialdata | This function loads a secuTrial export
subset_secuTrial | Subsets a 'secuTrialdata' object
units | Get variable labels for secuTrialdata objects
units<- | Get variable labels for secuTrialdata objects
visit_structure | Get the visit structure of 'secuTrialdata' objects
write_secuTrial | Write secuTrial exports to other formats
write_secuTrial.data.frame | Write secuTrial exports to other formats
write_secuTrial.secuTrialdata | Write secuTrial exports to other formats