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                                        SaTScan v9.4.4
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Program run on: Thu Apr 06 16:06:47 2017

Purely Spatial analysis
scanning for clusters with high rates
using the Discrete Poisson model.
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SUMMARY OF DATA

Study period.......................: 2000/1/1 to 2000/12/31
Number of locations................: 51
Total population...................: 293656844
Total number of cases..............: 158006
Annual cases / 100000..............: 53.7
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CLUSTERS DETECTED

1.Location IDs included.: 47, 21, 1, 13, 18, 28, 17, 45, 5, 39, 54, 29, 37, 51, 22, 12, 11, 24,
                          19, 42, 26, 40, 10
  Overlap with clusters.: 2, 3, 4, 5, 7, 9, 10
  Coordinates / radius..: (862.49,-140.007) / 1012.80
  Gini Cluster..........: No
  Population............: 145122755
  Number of cases.......: 90674
  Expected cases........: 78085.24
  Annual cases / 100000.: 62.4
  Observed / expected...: 1.16
  Relative risk.........: 1.38
  Log likelihood ratio..: 2012.298804
  P-value...............: < 0.00000000000000001

2.Location IDs included.: 5, 28, 29, 22, 40, 47, 1
  Overlap with clusters.: 1
  Coordinates / radius..: (322.337,-285.462) / 567.46
  Gini Cluster..........: Yes
  Population............: 29859204
  Number of cases.......: 20598
  Expected cases........: 16066.14
  Annual cases / 100000.: 68.8
  Observed / expected...: 1.28
  Relative risk.........: 1.32
  Log likelihood ratio..: 659.459354
  P-value...............: < 0.00000000000000001

3.Location IDs included.: 39, 54, 18, 21
  Overlap with clusters.: 1
  Coordinates / radius..: (1109.25,389.718) / 376.35
  Gini Cluster..........: Yes
  Population............: 23631063
  Number of cases.......: 16035
  Expected cases........: 12715.01
  Annual cases / 100000.: 67.7
  Observed / expected...: 1.26
  Relative risk.........: 1.29
  Log likelihood ratio..: 438.204200
  P-value...............: < 0.00000000000000001

4.Location IDs included.: 12
  Overlap with clusters.: 1
  Coordinates / radius..: (1322.6,-894.037) / 0
  Gini Cluster..........: Yes
  Population............: 17385430
  Number of cases.......: 12065
  Expected cases........: 9354.46
  Annual cases / 100000.: 69.3
  Observed / expected...: 1.29
  Relative risk.........: 1.31
  Log likelihood ratio..: 384.327906
  P-value...............: < 0.00000000000000001

5.Location IDs included.: 42
  Overlap with clusters.: 1
  Coordinates / radius..: (1512.12,523.602) / 0
  Gini Cluster..........: Yes
  Population............: 12394471
  Number of cases.......: 7973
  Expected cases........: 6669.01
  Annual cases / 100000.: 64.2
  Observed / expected...: 1.20
  Relative risk.........: 1.21
  Log likelihood ratio..: 125.537220
  P-value...............: < 0.00000000000000001

6.Location IDs included.: 23
  Overlap with clusters.: No Overlap
  Coordinates / radius..: (2068.85,1172.79) / 0
  Gini Cluster..........: Yes
  Population............: 1314985
  Number of cases.......: 951
  Expected cases........: 707.55
  Annual cases / 100000.: 72.2
  Observed / expected...: 1.34
  Relative risk.........: 1.35
  Log likelihood ratio..: 37.956296
  P-value...............: 0.0000000000000023

7.Location IDs included.: 45, 37
  Overlap with clusters.: 1
  Coordinates / radius..: (1381.46,-292.445) / 232.38
  Gini Cluster..........: Yes
  Population............: 12738360
  Number of cases.......: 7536
  Expected cases........: 6854.05
  Annual cases / 100000.: 59.0
  Observed / expected...: 1.10
  Relative risk.........: 1.10
  Log likelihood ratio..: 34.394487
  P-value...............: 0.000000000000071

8.Location IDs included.: 25, 44, 9, 33
  Overlap with clusters.: No Overlap
  Coordinates / radius..: (1962.88,783.26) / 161.49
  Gini Cluster..........: Yes
  Population............: 12285433
  Number of cases.......: 6939
  Expected cases........: 6610.34
  Annual cases / 100000.: 56.4
  Observed / expected...: 1.05
  Relative risk.........: 1.05
  Log likelihood ratio..: 8.395099
  P-value...............: 0.0051

9.Location IDs included.: 31, 46, 20, 19
  Overlap with clusters.: 1
  Coordinates / radius..: (-314.263,458.398) / 522.93
  Gini Cluster..........: Yes
  Population............: 8204926
  Number of cases.......: 4668
  Expected cases........: 4414.77
  Annual cases / 100000.: 56.8
  Observed / expected...: 1.06
  Relative risk.........: 1.06
  Log likelihood ratio..: 7.336438
  P-value...............: 0.012

10.Location IDs included.: 55, 26
   Overlap with clusters.: 1
   Coordinates / radius..: (475.215,811.334) / 367.36
   Gini Cluster..........: Yes
   Population............: 15607739
   Number of cases.......: 8729
   Expected cases........: 8397.95
   Annual cases / 100000.: 55.8
   Observed / expected...: 1.04
   Relative risk.........: 1.04
   Log likelihood ratio..: 6.807373
   P-value...............: 0.021

11.Location IDs included.: 41
   Overlap with clusters.: No Overlap
   Coordinates / radius..: (-1942.85,972.152) / 0
   Gini Cluster..........: No
   Population............: 3591363
   Number of cases.......: 2067
   Expected cases........: 1932.38
   Annual cases / 100000.: 57.4
   Observed / expected...: 1.07
   Relative risk.........: 1.07
   Log likelihood ratio..: 4.641932
   P-value...............: 0.180
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PARAMETER SETTINGS

Input
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  Case File        : H:\MyFiles\Rpackages\satscanMapper\example\stateLung.cas
  Population File  : H:\MyFiles\Rpackages\satscanMapper\example\stateLung.pop
  Time Precision   : None
  Start Time       : 2000/1/1
  End Time         : 2000/12/31
  Coordinates File : H:\MyFiles\Rpackages\satscanMapper\example\state.geo
  Coordinates      : Cartesian

Analysis
--------
  Type of Analysis    : Purely Spatial
  Probability Model   : Discrete Poisson
  Scan for Areas with : High Rates

Output
------
  Main Results File       : H:\MyFiles\Rpackages\satscanMapper\example\stateLung_output.txt
  Cluster File            : H:\MyFiles\Rpackages\satscanMapper\example\stateLung_output.col.txt
  Cluster File            : H:\MyFiles\Rpackages\satscanMapper\example\stateLung_output.col.dbf
  Stratified Cluster File : H:\MyFiles\Rpackages\satscanMapper\example\stateLung_output.sci.txt
  Stratified Cluster File : H:\MyFiles\Rpackages\satscanMapper\example\stateLung_output.sci.dbf
  Location File           : H:\MyFiles\Rpackages\satscanMapper\example\stateLung_output.gis.txt
  Location File           : H:\MyFiles\Rpackages\satscanMapper\example\stateLung_output.gis.dbf
  Risk Estimates File     : H:\MyFiles\Rpackages\satscanMapper\example\stateLung_output.rr.txt
  Risk Estimates File     : H:\MyFiles\Rpackages\satscanMapper\example\stateLung_output.rr.dbf
  Simulated LLRs File     : H:\MyFiles\Rpackages\satscanMapper\example\stateLung_output.llr.txt
  Simulated LLRs File     : H:\MyFiles\Rpackages\satscanMapper\example\stateLung_output.llr.dbf

Data Checking
-------------
  Temporal Data Check     : Check to ensure that all cases and controls are within the specified temporal study period.
  Geographical Data Check : Check to ensure that all observations (cases, controls and populations) are within the specified geographical area.

Spatial Neighbors
-----------------
  Use Non-Euclidian Neighbors file : No
  Use Meta Locations File          : No
  Multiple Coordinates Type        : Allow only one set of coordinates per location ID.

Spatial Window
--------------
  Maximum Spatial Cluster Size : 50 percent of population at risk
  Window Shape                 : Circular
  Isotonic Scan                : No

Space And Time Adjustments
--------------------------
  Adjust for known relative risks : No

Inference
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  P-Value Reporting                  : Default Combination
  Number of Replications             : 999
  Adjusting for More Likely Clusters : No

Border Analysis
---------------
  Report Oliveira's F : No

Spatial Output
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  Report Hierarchical Clusters              : Yes
  Criteria for Reporting Secondary Clusters : No Geographical Overlap
  Report Gini Optimized Cluster Collection  : Yes
  Gini Index Based Collection Reporting     : Optimal Only
  Report Gini Index Cluster Coefficents     : No
  Restrict Reporting to Smaller Clusters    : No

Other Output
------------
  Report Critical Values     : No
  Report Monte Carlo Rank    : No
  Print ASCII Column Headers : No

Run Options
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  Processer Usage   : All Available Proccessors
  Suppress Warnings : No
  Logging Analysis  : Yes
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Program completed  : Thu Apr 06 16:06:48 2017
Total Running Time : 1 second
Processor Usage    : 4 processors