Package: phybreak
Type: Package
Title: Analysis of Outbreaks with Sequence Data
Version: 0.2.0
Date: 2017-07-26
Authors@R: person("Don", "Klinkenberg", 
    email = "don@xs4all.nl", role = c("aut", "cre"))
Description: Implementation the outbreak analysis method described by 
    Klinkenberg et al (2017) <doi:10.1371/journal.pcbi.1005495>. 
    Simulate outbreaks, analyse datasets by creating samples from the 
    posterior distribution with a Markov-Chain Monte Carlo sampler, 
    and summarize the output.
License: GPL (>= 2)
LazyData: TRUE
Depends: R(>= 3.1.0), phangorn, ape
Imports: Rcpp (>= 0.12.1), methods, stats, stringr, utils
Suggests: coda, phytools, OutbreakTools, testthat, knitr, rmarkdown
LinkingTo: Rcpp
RoxygenNote: 6.0.1
VignetteBuilder: knitr
NeedsCompilation: yes
Packaged: 2017-07-30 09:06:18 UTC; don
Author: Don Klinkenberg [aut, cre]
Maintainer: Don Klinkenberg <don@xs4all.nl>
Repository: CRAN
Date/Publication: 2017-07-30 14:49:53 UTC
Built: R 4.0.2; x86_64-w64-mingw32; 2020-08-02 12:55:17 UTC; windows
Archs: i386, x64
