Package: CNVScope
Type: Package
Title: A Versatile Toolkit for Copy Number Variation Relationship Data
        Analysis and Visualization
Version: 3.1.8
Date: 2020-7-2
Author: James Dalgeish, Yonghong Wang, Jack Zhu, Paul Meltzer
Maintainer: James Dalgleish <james.dalgleish@nih.gov>
BugReports: https://github.com/jamesdalg/CNVScope/issues/
Depends: R (>= 3.5.0),ggplot2
Imports: tidyr,reshape2,magrittr, jointseg,plotly,shiny,RCurl,foreach,
        GenomicInteractions,Matrix,OpenImageR,biomaRt,matrixStats,
        plyr,data.table,dplyr,numbers,rtracklayer, doParallel,stringr
Suggests: knitr, rmarkdown,remotes,pwr,ComplexHeatmap,
        spatialfil,HiCseg,igraph,visNetwork,circlize,
        InteractionSet,GenomicRanges,GenomicFeatures,IRanges,rslurm,
        shinythemes,shinycssloaders,DT,logging,heatmaply,
        S4Vectors,BiocManager,shinyjs,htmltools,htmlwidgets,
        GenomeInfoDb,BSgenome.Hsapiens.UCSC.hg19,tibble
VignetteBuilder: knitr
URL: https://github.com/jamesdalg/CNVScope/
biocViews:
Description: Provides the ability to create interaction maps, discover CNV map domains (edges), gene annotate interactions, and create interactive visualizations of these CNV interaction maps.
License: BSD_3_clause + file LICENSE
RoxygenNote: 7.1.0
LazyData: true
NeedsCompilation: no
Packaged: 2020-07-02 22:07:06 UTC; dalgleishjl
Repository: CRAN
Date/Publication: 2020-07-03 04:30:03 UTC
Built: R 4.0.2; ; 2020-08-02 15:39:01 UTC; windows
