# Bayesian Synthetic Likelihood

## Documentation for package ‘BSL’ version 3.0.0

- DESCRIPTION file.

## Help Pages

BSL-package | Bayesian synthetic likelihood
BSL | Bayesian synthetic likelihood
bsl | Performing BSL, BSLasso and semiBSL
bsl-class | S4 class "bsl".
bsl-method | S4 class "bsl".
BSLModel | S4 class "BSLMODEL"
BSLMODEL-class | S4 class "BSLMODEL"
cell | Cell biology example
cell_logPrior | Cell biology example
cell_prior | Cell biology example
cell_sim | Cell biology example
cell_sum | Cell biology example
combinePlotsBSL | Plot the densities of multiple "bsl" class objects.
cor2cov | Convert a correlation matrix to a covariance matrix
fn | Functions to be used in bsl (for internal use)
fn-method | S4 class "BSLMODEL"
gaussianRankCorr | Gaussian rank correlation
gaussianSynLike | Estimating the Gaussian synthetic likelihood
gaussianSynLikeGhuryeOlkin | Estimating the Gaussian synthetic likelihood with an unbiased estimator
initialize.BSLMODEL | S4 class "BSLMODEL"
ma2 | An MA(2) model
ma2_logPrior | An MA(2) model
ma2_prior | An MA(2) model
ma2_sim | An MA(2) model
ma2_sum | An MA(2) model
marginalPostDefault | Plot method for class "bsl"
marginalPostGgplot | Plot method for class "bsl"
mgnk | The multivariate G&K example
mgnk_sim | The multivariate G&K example
mgnk_sum | The multivariate G&K example
new.bsl | S4 class "bsl".
penbsl | S3 reference class of the result from tuning to select the optimal penalty for BSLasso
plot | S4 class "bsl".
plot-method | S4 class "bsl".
plot.bsl | Plot method for class "bsl"
plot.penbsl | S3 reference class of the result from tuning to select the optimal penalty for BSLasso
print.penbsl | S3 reference class of the result from tuning to select the optimal penalty for BSLasso
selectPenalty | Selecting BSLasso Penalty
semiparaKernelEstimate | Estimating the semi-parametric joint likelihood
setns | Find the length of summary statistics (for internal use)
setns-method | S4 class "BSLMODEL"
show-method | S4 class "bsl".
show.bsl | Show method for class "bsl". Display the basic information of a bsl object.
summary | S4 class "bsl".
summary-method | S4 class "bsl".
summary.bsl | Summary method for class "bsl"
validBSLModelObject | S4 class "BSLMODEL"