RADami-package	RADami-package
compare.all.trees	compare.all.trees
consensus.pyRAD	consensus.pyRAD
filter.by	filter.by
gen.RAD.loci.datasets	gen.RAD.loci.datasets
genotypes.pyRAD.loci	genotypes.pyRAD.loci
genTrees	genTrees
get.raxml.siteLikelihoods	get.raxml.siteLikelihoods
get.raxml.treeLikelihoods	get.raxml.treeLikelihoods
grab.pyRAD.locus	grab.pyRAD.locus
lengths.report	lengths.report
locus.dist	locus.dist
match.lnL.to.trees	match.lnL.to.trees
oak.rads	oak.rads
oak.tree	oak.tree
overlap.report	overlap.report
pairwise.fst.loci	pairwise.fst
plot.locus.dist	plot.locus.dist
plot.partitionedRAD	plot.partitionedRAD
plot.rankedPartitionedRAD	plot.rankedPartitionedRAD
print.pyRAD.loci	print.pyRAD.loci
rad2mat	rad2mat
rad2phy	rad2phy
RADami	RADami-package
rank.partitionedRAD	rank.partitionedRAD
read.pyRAD	read.pyRAD
rtreePhylo	rtreePhylo
subset.pyRAD.loci	subset.pyRAD.loci
summary.pyRAD.loci	summary.pyRAD.loci
tidyName	tidyName
write.DNAStringSet	write.DNAStringSet
