bootstrap_estimator     Bootstrap parameter estimates for confidence
                        intervals.
calculate_annotation_block_heritability
                        Caclulate the contribution of block annotations
                        to the heritability of a trait.
calculate_block_values
                        Caclulate predicted block values based on block
                        information and model fit.
calculate_expected_block_values_given_ld
                        Caclulate predicted block values based on block
                        information and model fit.
cv_regularized_parameter_estimator
                        Perform regularization inference.
data_io                 Functions for opening and organizing data.
inference               Inference functions.
main_wrapper            Main wrapper functions.
make_ld_matrix          Helper function to pull LD data from NCBI.
make_results_df         Helper function to make a summary table of
                        results from bootstrap data.
parameter_estimator     Find parameter estimates for the data.
plot_rolypoly_annotation_estimates
                        Visualize parameter estimates after running
                        inference
plot_rolypoly_annotation_ranking
                        Rank annotations by p-value after running
                        inference
regularized_inference   Inference functions that include regularization
robust_parameter_estimator
                        Find robust parameter estimates for the data.
rolypoly                The rolypoly package for identifying
                        annotations associated with complex traits.
rolypoly_add_ld_corrected_gwas_block_scores
                        Add LD corrected block scores to rolypoly.
rolypoly_link_blocks_and_gwas
                        Link blocks and gwas
rolypoly_load_block_annotation
                        Load annotations for blocks of LD, in some
                        cases this is a gene annotation with a window
                        around a gene.
rolypoly_load_block_data
                        Block annotations, usually gene model.
rolypoly_load_gwas      Load gwas data
rolypoly_perform_inference
                        Run inference.
rolypoly_perform_regularized_inference
                        Run inference with added regularization.
rolypoly_plots          Plot functions.
rolypoly_roll           Main rolypoly wrapper function.
sim_block_annotation    Simulated block data annotation.
sim_expression_data_normalized
                        Simulated expression data.
sim_gwas_data           Simulated GWAS summary statistics
vectorize_rolypoly      Take a list of rolypoly data and vectorize it
                        for inference.
