MESS                    Collection of miscellaneous useful and
                        semi-useful functions
QIC.geeglm              Quasi Information Criterion
adaptive.weights        Compute weights for use with adaptive lasso.
add_torows              Fast addition of vector to each row of matrix
age                     Compute the age of a person from two dates.
auc                     Compute the area under the curve for two
                        vectors.
bdstat                  Danish live births and deaths
bees                    Bee data. Number of different types of bees
                        caught.
bin                     Fast binning of numeric vector into equidistant
                        bins
categorize              A table function to use with magrittr pipes
clotting                Blood clotting for 158 rats
cmd                     Correlation matrix distance
col.alpha               Add and set alpha channel for RGB color
col.shade               Shade an RGB color
col.tint                Tint an RGB color
colCumSum               Apply cumsum to each column of matrix
common.shared           Compute a common shared environment matrix
conditional_rowMeans    Form row means conditional on number of
                        non-missing
cumsumbinning           Binning based on cumulative sum with reset
                        above threshold
dCor                    Fast distance correlation matrix
dCov                    Fast distance covariance matrix
drop1.geeglm            Drop All Possible Single Terms to a geeglm
                        Model Using Wald or Score Test
drop1.geem              Drop All Possible Single Terms to a geem Model
                        Using Wald or Score Test
earthquakes             Earthquakes in 2015
expand_table            Expand table or matrix to data frame
extended.shared         Compute a common shared environment matrix
fac2num                 Convert factor to numeric vector
feature.test            Inference for features identified by the Lasso
filldown                Fill down NA with the last observed observation
founder.shared          Compute a common shared environment matrix
geekin                  Fit a generalized estimating equation (GEE)
                        model with fixed additive correlation structure
gkgamma                 Goodman-Kruskal's gamma statistic for a
                        two-dimensional table
greenland               Average yearly summer air temperature for
                        Tasiilaq, Greenland
happiness               Happiness score and tax rates for 148 countries
ht                      Show the head and tail of an object
hwe_frequencies         Fast estimation of allele and genotype
                        frequencies under Hardy-Weinberg equilibrium
icecreamads             Ice cream consumption and advertising
ks_cumtest              Kolmogorov-Smirnov goodness of fit test for
                        cumulative discrete data
kwdata                  Non-parametric Kruskal Wallis data example
lifeexpect              Estimated life expectancy for Danish newborns
lower.tri.vector        Split Matrix by Clusters and Return Lower
                        Triangular Parts as Vector
matched                 Flu hospitalization
maximum_subarray        Fast computation of maximum sum subarray
mfastLmCpp              Fast marginal simple regresion analyses
monte_carlo_chisq_test
                        Two-sided table test with fixed margins
nh4                     Ammonia nitrogen found in river
ordered.clusters        Check if unique elements of a vector appear in
                        contiguous clusters
pairwise.cor.test       Pairwise Tests for Association/Correlation
                        Between Paired Samples
pairwise_Schur_product
                        Compute Schur products (element-wise) of all
                        pairwise combinations of columns in matrix
pairwise_combination_indices
                        Compute all pairwise combinations of indices
panel.hist              Panel plot of histogram and density curve
panel.r2                Panel plot of R2 values for pairs
picea                   Ozone concentration damage to picea spruce
plr                     Fast computation of several simple linear
                        regressions
power_binom_test        Power Calculations for Exact Test of a simple
                        null hypothesis in a Bernoulli experiment
power_mcnemar_test      Power Calculations for Exact and Asymptotic
                        McNemar Test in a 2 by 2 table
power_prop_test         Power Calculations for Two-Sample Test for
                        Proportions with unequal sample size
power_t_test            Power calculations for one and two sample t
                        tests with unequal sample size
prepost.test            Pretest-posttest RCT for quantitative
                        observations with possible missing values
qdiag                   Fast extraction of matrix diagonal
qpcr                    Gene expression from real-time quantitative PCR
quadform                Fast quadratic form computation
rainman                 Perception of points in a swarm
repmat                  Fast replication of a matrix
residual_plot           Plots a standardized residual
residualplot.default    Plots a standardized residual
rmvt.pedigree           Simulate residual multivariate t-distributed
                        data from a polygenic model
rmvtnorm.pedigree       Simulate residual multivariate Gaussian data
                        from a polygenic model
rnorm_perfect           Simulate values from a perfect normal
                        distribution
rootonorm               Hanging rootogram for normal distribution
round_percent           Round vector of number to percentages
rud                     Simulate randomized urn design
scorefct                Internal functions for the MESS package
screen_variables        Screen variable before penalized regression
segregate.genes         Segregate genes through a pedigree
sinv                    Invert a symmetric positive-definite matrix
smokehealth             Effect of smoking on self reported health
soccer                  Danish national soccer players
superroot2              Gene expression data from two-color dye-swap
                        experiment
tracemp                 Fast computation of trace of matrix product
usd                     Unbiased standard deviation
wallyplot.default       Plots a Wally plot
write.xml               Write a data frame in XML format
