DAISIE-package          Dynamical Assembly of Islands by Speciation,
                        Immigration and Extinction
DAISIE_ExpEIN           The expected number of endemics and
                        non-endemics under the DAISIE model
DAISIE_ML               Maximization of the loglikelihood under the
                        DAISIE model
DAISIE_convertprobdist
                        Converts the joint distribution of endemics and
                        non-endemics under the DAISIE model to list
                        format
DAISIE_dataprep         Prepare colonisation and branching time data to
                        run in DAISIE.
DAISIE_loglik_all       Computes the loglikelihood of the DAISIE model
                        given data and a set of model parameters
DAISIE_margprobdist     The marginal distribution of endemics and
                        non-endemics under the DAISIE model
DAISIE_numcol           The expectation and marginal distribution of
                        the number of colonizations (lineages) under
                        the DAISIE model
DAISIE_plot_age_diversity
                        Plot clade age against clade diversity.
DAISIE_plot_island      Plot colonisation and branching time of species
                        found on an island dataset.
DAISIE_plot_sims        Plot island species-through-time (STT) plots
DAISIE_probdist         The joint distribution of endemics and
                        non-endemics under the DAISIE model
DAISIE_sim              Simulate islands with given parameters.
DAISIE_tutorial         Opens DAISIE tutorial
Galapagos_datalist      Colonization and branching times of 8
                        terrestrial avifaunal clades in list format,
                        accepted by DAISIE_ML and DAISIE_loglik_all
Galapagos_datalist_2types
                        Colonization and branching times of 8
                        terrestrial avifaunal clades in list format,
                        accepted by DAISIE_ML and DAISIE_loglik_all
Galapagos_datatable     Colonization and branching times of 8
                        terrestrial avifaunal clades in table format
Macaronesia_datalist    Colonization and branching times of terrestrial
                        avifaunal clades from Azores, Canary Islands,
                        Cape Verde and Madeira in list format, accepted
                        by DAISIE_ML and DAISIE_loglik_all
islands_10reps_RAW      1000 islands in RAW format simulated with the
                        ML parameters of the CR model for the Galapagos
                        data
islands_1type_1000reps
                        1000 islands in DAISIE format simulated with
                        the ML parameters of the CR model for the
                        Galapagos data
islands_2types_1000reps
                        1000 islands in DAISIE format simulated with
                        the ML parameters of the CR_lamc_mu_K model for
                        the Galapagos data (2 types of species)
