# 'Mangal' Client

## Documentation for package ‘rmangal’ version 2.0.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

as.igraph.mgNetwork | Coerce 'mgNetworksCollection' or 'mgNetwork' objects to 'igraph' objects.
as.igraph.mgNetworksCollection | Coerce 'mgNetworksCollection' or 'mgNetwork' objects to 'igraph' objects.
avail_type | List interactions type contains in mangal-db
clear_cache_rmangal | Clear memoise cache
combine_mgNetworks | Combine Mangal networks
get_citation | Retrieve all references pertaining to the networks collection or individual network
get_citation.mgNetwork | Retrieve all references pertaining to the networks collection or individual network
get_citation.mgNetworksCollection | Retrieve all references pertaining to the networks collection or individual network
get_collection | Get a collection of networks
get_collection.default | Get a collection of networks
get_collection.mgSearchDatasets | Get a collection of networks
get_collection.mgSearchInteractions | Get a collection of networks
get_collection.mgSearchNetworks | Get a collection of networks
get_collection.mgSearchNodes | Get a collection of networks
get_collection.mgSearchReferences | Get a collection of networks
get_collection.mgSearchTaxonomy | Get a collection of networks
get_network_by_id | Retrieve network informations, nodes, edges and references for a given set of Mangal network IDs
get_network_by_id_indiv | Retrieve network informations, nodes, edges and references for a given set of Mangal network IDs
print.mgNetwork | Retrieve network informations, nodes, edges and references for a given set of Mangal network IDs
print.mgNetworksCollection | Retrieve network informations, nodes, edges and references for a given set of Mangal network IDs
search_datasets | Query datasets
search_interactions | Query interactions
search_networks | Query networks
search_networks_sf | Query networks
search_nodes | Query nodes
search_references | Query references
search_taxonomy | Query taxonomy
summary.mgNetwork | Retrieve network informations, nodes, edges and references for a given set of Mangal network IDs
summary.mgNetworksCollection | Retrieve network informations, nodes, edges and references for a given set of Mangal network IDs