Type: Package
Package: qtl2pleio
Title: Testing Pleiotropy in Multiparental Populations
Version: 1.3.0
Authors@R: 
    person(given = "Frederick J",
           family = "Boehm",
           role = c("aut", "cre"),
           email = "frederick.boehm@gmail.com",
           comment = c(ORCID = "0000-0002-1644-5931"))
Maintainer: Frederick J Boehm <frederick.boehm@gmail.com>
Description: We implement an
    adaptation of Jiang & Zeng's (1995) <https://www.genetics.org/content/140/3/1111> likelihood ratio test for testing
    the null hypothesis of pleiotropy against the alternative hypothesis,
    two separate quantitative trait loci. The test differs from that in Jiang & Zeng (1995) <https://www.genetics.org/content/140/3/1111> 
    and that in Tian et al. (2016) <doi:10.1534/genetics.115.183624> in
    that our test accommodates multiparental populations.
License: MIT + file LICENSE
URL: https://github.com/fboehm/qtl2pleio
BugReports: https://github.com/fboehm/qtl2pleio/issues
Depends: R (>= 3.1)
Imports: dplyr, gemma2, ggplot2, magrittr, MASS, Rcpp, rlang, tibble,
        Matrix, furrr
Suggests: covr, future, mvtnorm, knitr, rmarkdown, testthat, broman,
        devtools, qtl2
LinkingTo: Rcpp, testthat, RcppEigen
Encoding: UTF-8
Language: en-US
LazyData: true
NeedsCompilation: yes
RoxygenNote: 7.1.0
Packaged: 2020-06-30 16:15:05 UTC; fred
Author: Frederick J Boehm [aut, cre] (<https://orcid.org/0000-0002-1644-5931>)
Repository: CRAN
Date/Publication: 2020-06-30 19:00:02 UTC
Built: R 4.1.0; x86_64-w64-mingw32; 2020-08-03 12:20:32 UTC; windows
Archs: i386, x64
