# Generate 'BART' File

## Documentation for package ‘genBart’ version 1.0.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

clusterData | Hierarchical clustering of normalized expression data
crossCorr | Cross Correlations
gene.symbols | Gene Symbols
genFile | Generate and Update BART Result files
genModelResults | Generate formatted results file
genModScores | Generate modular (gene set) maps for plotting
metaData | Declare meta data information for downstream analysis
modules | Baylor Modules
normalizeData | Data Normalization
runBart | Run BART Shiny App
runQgen | Run Q-Gen (generalized QuSAGE) algorithm using gene level statistics
tb.design | Microarray design file
tb.expr | Microarray data on cynomolgus macaques infected with M. tuberculosis
tb.flow | Flow data on cynomolgus macaques infected with M. tuberculosis
tb.flow.des | Flow design file
updateFile | Generate and Update BART Result files