7621d0b7f70e2941d9d413b131ca51f5 *DESCRIPTION
7761cf66d0f091fa5da6ad4644933c9f *INDEX
039f6ffcc4472fedcf0986fef81be698 *Meta/Rd.rds
ebab019f5c643f33b809d09da9273f32 *Meta/data.rds
c8440c06be5e093e05779d74c0ffa6b7 *Meta/features.rds
463593a76f3635537544d42ae5775084 *Meta/hsearch.rds
94db91e957ba87e7bb4dad5134259a10 *Meta/links.rds
441fc5090f846ca8a2cc2efd27014286 *Meta/nsInfo.rds
8fb83abc2065f8fbce01b29ba9319eb4 *Meta/package.rds
f6330dff9f8e3bdea525295af30f7e03 *Meta/vignette.rds
bcf7d987e195fd2fb31b6c3affc0164c *NAMESPACE
b82c14153fa6e0ecde31fe8fecffabee *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/chicane
f9d3ae4971f51dffd3321b66701f7067 *R/chicane.rdb
d873321b4f5b2d8825537775af482010 *R/chicane.rdx
6e9d0b3e833252a15bc49e98ec3fbee3 *bin/prepare_bam.sh
dda5c1fca4186a7b5ced507b1c54e849 *data/Rdata.rdb
e5d87ce1c8205f84d583248b83636a29 *data/Rdata.rds
5bec81a70eddf651726041a504bc6b1e *data/Rdata.rdx
66047b2511208c9f56b361551cb5c1d1 *doc/Introduction.R
d1aeed6637aaa75583118a3987ecfa45 *doc/Introduction.Rmd
2956d872301e18a66ade549eef57b03d *doc/Introduction.html
b07509c8de8b480cd9f553108165a1ad *doc/Visualising_Interactions.R
8cb5fa437e4703ab9ee7f9457d5aa72f *doc/Visualising_Interactions.Rmd
ca71bec84c613a9bf949c5855625be05 *doc/Visualising_Interactions.html
75fc93c34bd9b3ff38df4b89306549ec *doc/index.html
9694870bc2e4418cc0da3ff1268baefa *extdata/2q35.bed
8e0324f0ea4ef14fc866fdc9d6617c0c *extdata/Bre80_2q35.bam
77de0629d4337e8589101295e928d2b0 *extdata/GRCh38_HindIII_chr2.bed.gz
4669a4755d16f56edef27d94e2c48369 *extdata/HiCUP_digest_example.txt
08ac28976f25554458f20b220d99902d *extdata/T47D_2q35_filtered_chicane_calls.txt
2f808b14e72d467223a8e5cd6b134458 *extdata/T47D_chr2_CTCF.bed.gz
da9476d831a0e737b7db65ed4153a0ec *extdata/gencode_2q35.gtf
ee163524629ee726340f7e040152ecf2 *extdata/read_count_test.bam
06e7e9ddf38045653625d5e85f9666aa *extdata/read_count_test_cis.bam
b26196c3fcf6126f066cda2dc3a39532 *help/AnIndex
a038941773a8f06313ea386c4894b323 *help/aliases.rds
f6bc6c5ee337c526dea6497712a74d31 *help/chicane.rdb
166d3f65fc9d9b0f112945da41475797 *help/chicane.rdx
d9b3bc6a70e800c6bd08f424d0c1aea3 *help/paths.rds
e67e7098f3d7f8ccb0a5af62a007fec8 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
