.addChangedAttr,simList-method
                        '.addChangedAttr' for 'simList' objects
.addTagsToOutput,simList-method
                        '.addTagsToOutput' for 'simList' objects
.cacheMessage,simList-method
                        '.cacheMessage' for 'simList' objects
.checkCacheRepo,list-method
                        '.checkCacheRepo' for 'simList' objects
.fileExtensions         File extensions map
.findSimList            Find 'simList' in a nested list
.parseElems,simList-method
                        .parseElems for simList class objects
.preDigestByClass,simList-method
                        Pre-digesting method for 'simList'
.prepareOutput,simList-method
                        '.prepareOutput' for 'simList' objects
.quickCheck             The 'SpaDES.core' variable to switch between
                        quick and robust checking
.robustDigest,simList-method
                        '.robustDigest' for 'simList' objects
.tagsByClass,simList-method
                        '.tagsByClass' for 'simList' objects
Copy,simList-method     Copy for simList class objects
Plot,simList-method     Plot method for 'simList' objects
SpaDES.core-package     Categorized overview of the 'SpaDES.core'
                        package
all.equal.simList       All equal method for simLists
append_attr             Add a module to a 'moduleList'
checkModule             Check for the existence of a remote module
checkModuleLocal        Check for the existence of a module locally
checkObject             Check for existence of object(s) referenced by
                        a 'objects' slot of a 'simList' object
checkParams             Check use and existence of params passed to
                        simulation.
checksums               Calculate checksum for a module's data files
classFilter             Filter objects by class
clearCache,simList-method
                        'clearCache' for 'simList' objects
copyModule              Create a copy of an existing module
createsOutput           Define an output object of a module
defineModule            Define a new module.
defineParameter         Define a parameter used in a module
depsEdgeList            Build edge list for module dependency graph
depsGraph               Build a module dependency graph
doEvent.checkpoint      Simulation checkpoints.
downloadData            Download module data
downloadModule          Download a module from a SpaDES module GitHub
                        repository
dyears                  SpaDES time units
envir                   Simulation environment
eventDiagram            Simulation event diagram
events                  Simulation event lists
expectsInput            Define an input object that the module expects.
experiment              Deprecated functions
extractURL              Extract a url from module metadata
fileName                Extract filename (without extension) of a file
getModuleVersion        Find the latest module version from a SpaDES
                        module repository
globals                 Get and set global simulation parameters
inSeconds               Convert time units
initialize,simList-method
                        Generate a 'simList' object
inputObjects            Metadata accessors
inputs                  Simulation inputs
loadPackages            Load packages.
loadSimList             Load a saved 'simList' from file
makeMemoisable.simList
                        Make 'simList' correctly work with 'memoise'
maxTimeunit             Determine the largest timestep unit in a
                        simulation
memoryUseThisSession    Estimate memory used with 'system("ps")'
minTimeunit             Determine the smallest timeunit in a simulation
moduleCoverage          Calculate module coverage of unit tests
moduleDefaults          Defaults values used in defineModule
moduleDiagram           Simulation module dependency diagram
moduleGraph             Build a module dependency graph
moduleMetadata          Parse and extract module metadata
moduleParams            Extract a module's parameters, inputs, or
                        outputs
moduleVersion           Parse and extract a module's version
modules                 Simulation modules and dependencies
newModule               Create new module from template
newModuleCode           Create new module code file
newModuleDocumentation
                        Create new module documentation
newModuleTests          Create template testing structures for new
                        modules
newProgressBar          Progress bar
newProject              Create new SpaDES project
newProjectCode          Create new module code file
objSize.simList         Object size for 'simList'
objectDiagram           Simulation object dependency diagram
objectSynonyms          Identify synonyms in a 'simList'
objs                    Extract or replace an object from the
                        simulation environment
openModules             Open all modules nested within a base directory
outputs                 Simulation outputs
packages                Get module or simulation package dependencies
paddedFloatToChar       Convert numeric to character with padding
params                  Get and set simulation parameters
paths                   Specify paths for modules, inputs, outputs, and
                        temporary rasters
priority                Event priority
progressInterval        Get and set simulation progress bar details
rasterToMemory          Read raster to memory
remoteFileSize          Determine the size of a remotely hosted file
restartR                Restart R programmatically
restartSpades           Restart an interrupted simulation
rndstr                  Generate random strings
saveFiles               Save objects using '.saveObjects' in 'params'
                        slot of 'simInit'
saveSimList             Save a whole 'simList' object to disk
scheduleConditionalEvent
                        Schedule a conditional simulation event
scheduleEvent           Schedule a simulation event
show,simList-method     Show an Object
simInit                 Initialize a new simulation
simInitAndSpades        Call 'simInit' and 'spades' together
simList-class           The 'simList' class
spades                  Run a spatial discrete event simulation
spadesClasses           Classes defined in SpaDES
spadesOptions           'SpaDES.core' options
suppliedElsewhere       Assess whether an object has or will be
                        supplied from elsewhere
times                   Time usage in 'SpaDES'
updateList              Update elements of a named list with elements
                        of a second named list
zipModule               Create a zip archive of a module subdirectory
zipSimList              Zip many of the files in a 'simList'
