.DesM                   Design Matrix For Pairwise Differences
.dummyze                From Factor To Dummy Variables
.makePValueMat          Construct Univariate _p_-Values Matrix
.makePermSpaceID        Constructs Row Indices Permutation Space
.orthoX                 Residualises the response variables _w.r.t._
                        the matrix of covariates like in the linear
                        models, therefore projecting on the space I - H
                        where H is the _hat_ matrix of X
BHS                     Multiplicity adjustment by
                        Bonferroni-Holm-Shaffer's rule
FWEminP                 FWE Adjustment Using Permutation
NPC                     NonParametric Combination of Test Statistic
PValueMat               Class 'PValueMat'
PermSpace               Class 'PermSpace'
RankResults             Ranking Results
SOUP                    SOUP Main Function
SoupObject              Class 'SoupObject'
as.list                 Methods for function 'as.list' in package
                        'SOUP'
initialize              Methods for function 'initialize' in package
                        'SOUP': constructor
iterNPC                 Iterated NonParametric Combination
print                   'signature(x = "PermSpace")' It prints the
                        whole object on screen (mostly useful for
                        external saving)
rankingRule             Performs the ranking
show                    'signature(object = "PermSpace")' Shows only
                        the main information (on screen) for the object
t2p                     From Test Statistics To _p_-Values
