Package: RaceID
Title: Identification of Cell Types and Inference of Lineage Trees from
        Single-Cell RNA-Seq Data
Version: 0.2.0
Date: 2020-05-19
Author: Dominic Grün <dominic.gruen@gmail.com>
Maintainer: Dominic Grün <dominic.gruen@gmail.com>
Description: Application of 'RaceID' allows inference of cell types and prediction of lineage trees by he StemID2 algorithm. Herman, J.S., Sagar, Grün D. (2018) <DOI:10.1038/nmeth.4662>.
Depends: R (>= 3.3)
biocViews:
Imports: coop, compiler, cluster, FateID, FNN, fpc, ggplot2, grDevices,
        ica, igraph, irlba, locfit, methods, MASS, Matrix, NlcOptim,
        parallel, pheatmap, propr, quadprog, randomForest, Rcpp,
        RColorBrewer, Rtsne, umap, vegan
LinkingTo: Rcpp (>= 0.11.0)
Suggests: batchelor, DESeq2, destiny, knitr, rmarkdown,
        SummarizedExperiment
VignetteBuilder: knitr
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.0.2
NeedsCompilation: yes
Packaged: 2020-05-19 20:38:08 UTC; d.grun
Repository: CRAN
Date/Publication: 2020-05-20 14:30:02 UTC
Built: R 4.1.0; x86_64-w64-mingw32; 2020-08-03 14:15:28 UTC; windows
Archs: i386, x64
