Encoding: UTF-8
Package: PINSPlus
Type: Package
Title: Clustering Algorithm for Data Integration and Disease Subtyping
Version: 2.0.4
Date: 2020-05-30
Author: Hung Nguyen, Bang Tran, Duc Tran and Tin Nguyen
Maintainer: Hung Nguyen <hungnp@nevada.unr.edu>
Description: Provides a robust approach for omics data integration and disease subtyping. PINSPlus is fast and supports the analysis of large datasets with hundreds of thousands of samples and features. The software automatically determines the optimal number of clusters and then partitions the samples in a way such that the results are robust against noise and data perturbation (Nguyen et.al. (2019) <DOI: 10.1093/bioinformatics/bty1049>, Nguyen et.al. (2017)<DOI: 10.1101/gr.215129.116>).
License: LGPL
Depends: R (>= 2.10)
Imports: foreach, entropy , doParallel, matrixStats, Rcpp,
        RcppParallel, FNN, cluster, irlba, mclust
RoxygenNote: 7.1.0
Suggests: knitr, rmarkdown, survival
LinkingTo: Rcpp, RcppArmadillo, RcppParallel
VignetteBuilder: knitr
NeedsCompilation: yes
Packaged: 2020-05-30 22:45:34 UTC; bya
Repository: CRAN
Date/Publication: 2020-05-31 01:30:03 UTC
Built: R 4.1.0; x86_64-w64-mingw32; 2020-08-03 08:28:51 UTC; windows
Archs: i386, x64
