'SBML' Integration in Package 'Sybil'


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Documentation for package ‘sybilSBML’ version 3.1.2

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closeSBMLfile Close SBML File
delSBMLmodel Delete Pointer to SBML Model
getNumErrors Class '"sbmlError"'
getNumErrors-method Class '"sbmlError"'
getSBMLCompartList Get Compartment List
getSBMLerrors Get SBML Errors
getSBMLFbcversion Get SBML Version
getSBMLlevel Get SBML Level
getSBMLmodAnnotation Get Model Annotation
getSBMLmodel Get SBML Model
getSBMLmodId Get Model Id
getSBMLmodName Get Model Name
getSBMLmodNotes Get Model Note
getSBMLnumCompart Get Number of Compartments
getSBMLnumReactions Get Number of Reactions
getSBMLnumSpecies Get Number of Species
getSBMLReactionsList Get Reaction List
getSBMLSpeciesList Get Species List
getSBMLunitDefinitionsList Get Unit Definitions List
getSBMLversion Get SBML Version
isAvailableFbcPlugin Check for libSBML FBC plugin
isAvailableGroupsPlugin Check for libSBML Groups plugin
isNULLpointerSBML Class '"sbmlPtr"'
isNULLpointerSBML-method Class '"sbmlPtr"'
isSBMLdocpointer Class '"sbmlPtr"'
isSBMLdocpointer-method Class '"sbmlPtr"'
isSBMLmodpointer Class '"sbmlPtr"'
isSBMLmodpointer-method Class '"sbmlPtr"'
length-method Class '"sbmlError"'
openSBMLfile Open SBML File
printSlot Class '"sbmlError"'
printSlot-method Class '"sbmlError"'
readSBMLmod Reads a Metabolic Network in SBML Format
sbmlDocKey Class '"sbmlPtr"'
sbmlDocKey-method Class '"sbmlError"'
sbmlDocKey-method Class '"sbmlPtr"'
sbmlDocPointer Class '"sbmlPtr"'
sbmlError Class '"sbmlError"'
sbmlError-class Class '"sbmlError"'
sbmlErrors Class '"sbmlError"'
sbmlErrors-method Class '"sbmlError"'
sbmlFatals Class '"sbmlError"'
sbmlFatals-method Class '"sbmlError"'
sbmlFileName Class '"sbmlPtr"'
sbmlFileName-method Class '"sbmlError"'
sbmlFileName-method Class '"sbmlPtr"'
sbmlInfos Class '"sbmlError"'
sbmlInfos-method Class '"sbmlError"'
sbmlModPointer Class '"sbmlPtr"'
sbmlPointer Class '"sbmlPtr"'
sbmlPointer-method Class '"sbmlPtr"'
sbmlPtr-class Class '"sbmlPtr"'
sbmlPtrType Class '"sbmlPtr"'
sbmlPtrType-method Class '"sbmlPtr"'
sbmlWarnings Class '"sbmlError"'
sbmlWarnings-method Class '"sbmlError"'
validateSBMLdocument Validate SBML
versionLibSBML Get libSBML Version
writeSBML Exports a Metabolic Network in SBML Format