add_extra_na_cols | Add extra columns filled with NA values to a dataset. |
calculate_columns_from_existing_data | Cumulative counts from daily counts or daily counts from cumulative, dependent on which columns already exist |
complete_cumulative_columns | Completes cumulative columns if rows were added with NAs. |
convert_to_covid19R_format | Convert data to Covid19R package data standard |
csv_reader | Custom CSV reading function |
fill_empty_dates_with_na | Add rows of NAs for dates where a region does not have any data |
get_afghan_regional_cases | Afghan Regional Daily COVID-19 Count Data |
get_afghan_region_codes | Afghan region codes |
get_authority_lookup_table | Lookup table for local authority structure for the UK |
get_belgium_level_2_codes | Belgian Provincial region codes |
get_belgium_regional_cases_only_level_1 | Belgian Regional Daily COVID-19 Count Data - Regions Only |
get_belgium_regional_cases_with_level_2 | Belgian Provincial Daily COVID-19 Count Data - Regions and Provinces |
get_belgium_region_codes | Belgian region codes |
get_brazil_level_2_codes | Brazilian level 2 codes (not available currently) |
get_brazil_regional_cases_only_level_1 | Brazilian Regional Daily COVID-19 Count Data - States |
get_brazil_regional_cases_with_level_2 | Brazilian Regional Daily COVID-19 Count Data - Cities |
get_brazil_region_codes | Brazilian region codes |
get_canada_regional_cases | Canadian Regional Daily COVID-19 Count Data - Provinces |
get_canada_region_codes | Canadian region codes |
get_colombia_regional_cases | Colombian Regional Daily COVID-19 Count Data - Department |
get_colombia_region_codes | Colombia region codes |
get_cumulative_from_daily | Cumulative counts from daily counts. |
get_daily_from_cumulative | Daily counts from data that is in cumulative form. |
get_ecdc_cases | ECDC International Case Counts: works within get_national_data |
get_germany_level_2_codes | German level 2 codes (not available currently) |
get_germany_regional_cases_only_level_1 | German Regional Daily COVID-19 Count Data - Bundesland |
get_germany_regional_cases_with_level_2 | German Regional Daily COVID-19 Count Data - Landkreis |
get_germany_region_codes | German region codes |
get_india_regional_cases | Indian Regional Daily COVID-19 Count Data - State |
get_india_region_codes | Indian region codes |
get_info_covidregionaldata | Get meta information about the covidregionaldata refresh_* data getters. |
get_interventions_data | Import ACAPS Government Interventions dataset |
get_italy_regional_cases | Regional Daily COVID-19 Count Data |
get_italy_region_codes | Italian region codes |
get_level_2_region_codes | Get a table of level 2 region codes (FIPS, ONS, region) for a specified country |
get_linelist | Get Linelist Data |
get_national_data | Get national-level data for countries globally, sourced from the ECDC or WHO. |
get_regional_data | The main calculation function for covidregionaldata. The majority of the work is done in this function. |
get_region_codes | Get a table of region codes for a specified country |
get_russia_regional_cases | Russian Regional Daily COVID-19 Count Data - Region |
get_russia_region_codes | Russian region codes |
get_uk_level_2_codes | UK level 2 codes (ONS) (Included in original function) |
get_uk_regional_cases_only_level_1 | UK Regional Daily COVID-19 Count Data - Region |
get_uk_regional_cases_with_level_2 | UK Regional Daily COVID-19 Count Data - Authority |
get_uk_region_codes | UK region codes (NULL - they're in the raw data already) |
get_us_level_2_codes | US level 2 codes (FIPS) (Included in original function) |
get_us_regional_cases_only_level_1 | US Regional Daily COVID-19 Count Data - States |
get_us_regional_cases_with_level_2 | US Regional Daily COVID-19 Count Data - Counties |
get_us_region_codes | US region codes |
get_who_cases | Download the most recent WHO case data |
left_join_region_codes | Custom left_join function |
refresh_covidregionaldata_afghanistan | Get daily Afghan COVID-19 count data by Province (Wilayat) |
refresh_covidregionaldata_belgium | Get daily Belgian COVID-19 count data by Region |
refresh_covidregionaldata_brazil | Get daily Brazilian COVID-19 count data by State (Estado) |
refresh_covidregionaldata_canada | Get daily Canada COVID-19 count data by Province/Territory |
refresh_covidregionaldata_colombia | Get daily Colombian COVID-19 count data by Department (Departamento). |
refresh_covidregionaldata_germany | Get daily German COVID-19 count data by State (Bundesland) |
refresh_covidregionaldata_india | Get daily Indian COVID-19 count data by State/Unified Territory |
refresh_covidregionaldata_italy | Get daily Italian COVID-19 count data by Region (Regioni). |
refresh_covidregionaldata_russia | Get daily Russian COVID-19 count data by Russian region. |
refresh_covidregionaldata_uk | Get daily UK COVID-19 count data by EU-defined region |
refresh_covidregionaldata_usa | Get daily USA COVID-19 count data by state. |
rename_region_code_column | Helper to rename the region code column in each dataset to the correct code type for each country (e.g. ISO-3166-2). |
rename_region_column | Helper to rename the region column in each dataset to the correct name for each country. |
reset_cache | Reset Cache and Update all Local Data |
set_negative_values_to_zero | Set negative data to 0 |
start_using_memoise | Add useMemoise to options |
stop_using_memoise | Stop using useMemoise |
totalise_data | Get totals data given the time series data. |