Bayesian State-Space Models for Animal Movement

Documentation for package ‘bsam’ version 1.1.2

bsam-package	Fit Bayesian state-space models to animal tracking data
bsam	Fit Bayesian state-space models to animal tracking data
dat4jags	Correlated Random Walk Filter
diagSSM	Deprecated functions.
diag_ssm	Plot standard McMC convergence diagnostics to help determine lack of model convergence.
ellie	Elephant seal Argos satellite data (2 individuals)
fitSSM	Deprecated functions.
fit_ssm	Fit Bayesian state-space models to animal movement data
get_summary	Extract summary output and optionally export as a .csv file.
hssm	Fits hierarchical state-space models to Argos data
map_ssm	Plot estimated track, behavioural states and observations on a map.
plotSSM	Deprecated functions.
plot_fit	Plot the 1-D time-series of estimated location and behavioural states
simulate	Simulate from the DCRW model with Argos location errors
ssm	Fits state-space models to Argos data
tpar	ARGOS Error Fixed Parameters