Dose Response for Omics


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Documentation for package ‘DRomics’ version 2.0-1

Help Pages

DRomics-package Overview of the 'DRomics' package
bmdboot Computation of confidence interval on benchmark doses by bootstrap
bmdcalc Computation of benchmark doses for responsive items
curvesplot Plot of fitted curves
drcfit Dose response modelling for responsive items
DRomics Overview of the 'DRomics' package
ecdfplotwithCI ECDF plot of a variable with given confidence intervals on this variable
itemselect Selection of significantly responsive items
metabolomicdata Import and check of metabolomic data
microarraydata Import, check and normalization of single-channel microarray data
omicdata Import, check and normalization of single-channel microarray data
plot.bmdboot Computation of confidence interval on benchmark doses by bootstrap
plot.bmdcalc Computation of benchmark doses for responsive items
plot.drcfit Dose response modelling for responsive items
plot.metabolomicdata Import and check of metabolomic data
plot.microarraydata Import, check and normalization of single-channel microarray data
plot.RNAseqdata Import, check and normalization and transformation of RNAseq data
print.bmdboot Computation of confidence interval on benchmark doses by bootstrap
print.bmdcalc Computation of benchmark doses for responsive items
print.drcfit Dose response modelling for responsive items
print.itemselect Selection of significantly responsive items
print.metabolomicdata Import and check of metabolomic data
print.microarraydata Import, check and normalization of single-channel microarray data
print.RNAseqdata Import, check and normalization and transformation of RNAseq data
RNAseqdata Import, check and normalization and transformation of RNAseq data