# Fuzzy Clustering of Vegetation Data

## Documentation for package ‘vegclust’ version 1.7.7

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

vegclust-package | Fuzzy Clustering of Vegetation Data Functions for fuzzy and hard clustering of vegetation data
as.memb | Turns into membership matrix
as.stratifiedvegdata | Reshapes community data from individual into stratified form
as.vegclust | Turns into vegclust objects
avoca | Avoca permanent plot dataset
avoca_sites | Avoca permanent plot dataset
avoca_strat | Avoca permanent plot dataset
avoca_surveys | Avoca permanent plot dataset
CAP | Cumulative abundance profile (CAP)
CAP2matrix | Cumulative abundance profile (CAP)
CAPcenters | Cumulative abundance profile (CAP)
CAPquantile | Cumulative abundance profile (CAP)
CAS | Cumulative abundance surface (CAS)
CAS2matrix | Cumulative abundance surface (CAS)
CAScenters | Cumulative abundance surface (CAS)
CASmargin | Cumulative abundance surface (CAS)
CASquantile | Cumulative abundance surface (CAS)
centerTrajectories | Community trajectory analysis
clustcentroid | Cluster centers of a classification
clustconst | Constancy table of a classification
clustmedoid | Cluster centers of a classification
clustvar | Cluster variance
concordance | Concordance between two classifications
conformveg | Conform two community data tables
crossmemb | Cross-table of two fuzzy classifications
defuzzify | Defuzzifies a fuzzy partition
hcr | Heterogeneity-constrained random resampling (HCR)
hier.vegclust | Clustering with several number of clusters
hier.vegclustdist | Clustering with several number of clusters
incr.vegclust | Noise clustering with increasing number of clusters
interclustdist | Calculates the distance between pairs of cluster centroids
is.metric | Community trajectory analysis
medreg | Regeneration of Mediterranean vegetation data set
plot.CAP | Draws cummulative abundance profiles
plot.CAS | Draws a cummulative abundance surface
plot.mvegclust | Plots clustering results
plot.stratifiedvegdata | Draws cummulative abundance profiles
random.vegclust | Clustering with several number of clusters
random.vegclustdist | Clustering with several number of clusters
relate.levels | Relates two clustering level results.
segmentDistances | Community trajectory analysis
stratifyvegdata | Reshapes community data from individual into stratified form
summary.clustconst | Constancy table of a classification
trajectories | Community trajectory analysis
trajectoryAngles | Community trajectory analysis
trajectoryConvergence | Community trajectory analysis
trajectoryDirectionality | Community trajectory analysis
trajectoryDistances | Community trajectory analysis
trajectoryLengths | Community trajectory analysis
trajectoryPCoA | Community trajectory analysis
trajectoryPlot | Community trajectory analysis
trajectoryProjection | Community trajectory analysis
trajectorySelection | Community trajectory analysis
treedata | Synthetic vegetation data set with tree data
vegclass | Classifies vegetation communities
vegclust | Vegetation clustering methods
vegclust2kmeans | Reshapes as kmeans object
vegclustdist | Vegetation clustering methods
vegclustIndex | Compute fuzzy evaluation statistics
vegdiststruct | Structural and compositional dissimilarity
wetland | Wetland vegetation data set