Package: tigger
Type: Package
Version: 0.4.0
Date: 2019-07-18
Authors@R: c(person("Daniel", "Gadala-Maria", role=c("aut"), 
                    email="daniel.gadala-maria@yale.edu"),
             person("Susanna", "Marquez", role=c("aut"), 
                    email="susanna.marquez@yale.edu"),                    
             person("Moriah", "Cohen", role=c("aut"), 
                    email="moriah.cohen@biu.ac.il"),   
             person("Gur", "Yaari", role=c("aut"), 
                    email="gur.yaari@biu.ac.il"),
             person("Jason", "Vander Heiden", role=c("ctb", "cre"), 
                    email="jason.vanderheiden@yale.edu"),
             person("Steven", "Kleinstein", role=c("aut", "cph"), 
                    email="steven.kleinstein@yale.edu"))
Title: Infers Novel Immunoglobulin Alleles from Sequencing Data
Description: Infers the V genotype of an individual from immunoglobulin (Ig)
    repertoire sequencing data (AIRR-Seq, Rep-Seq). Includes detection of 
    any novel alleles. This information is then used to correct existing V 
    allele calls from among the sample sequences.
    Citations:
    Gadala-Maria, et al (2015) <doi:10.1073/pnas.1417683112>.
License: CC BY-SA 4.0
URL: http://tigger.readthedocs.io
BugReports: https://bitbucket.org/kleinstein/tigger/issues
LazyData: true
BuildVignettes: true
VignetteBuilder: knitr
Encoding: UTF-8
Depends: R (>= 3.2.5), ggplot2 (>= 3.1.1)
Imports: alakazam (>= 0.3.0), dplyr (>= 0.8.1), doParallel, foreach,
        graphics, gridExtra, gtools, iterators, lazyeval, parallel,
        rlang, shazam (>= 0.2.0), stats, stringi, tidyr
Suggests: knitr, testthat
RoxygenNote: 6.1.1
NeedsCompilation: no
Packaged: 2019-07-19 05:20:14 UTC; vandej27
Author: Daniel Gadala-Maria [aut],
  Susanna Marquez [aut],
  Moriah Cohen [aut],
  Gur Yaari [aut],
  Jason Vander Heiden [ctb, cre],
  Steven Kleinstein [aut, cph]
Maintainer: Jason Vander Heiden <jason.vanderheiden@yale.edu>
Repository: CRAN
Date/Publication: 2019-07-19 05:40:03 UTC
Built: R 4.0.0; ; 2020-04-10 12:11:24 UTC; windows
