Cell-Type-Specific Association Testing in Bulk Omics Experiments

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Documentation for package ‘omicwas’ version 0.3.1

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ctassoc Cell-Type-Specific Association Testing
ctcisQTL Cell-Type-Specific QTL analysis
ctRUV Remove Unwanted Variations prior to applying ctassoc
GSE42861small Small Subset of GSE42861 Dataset From GEO
GSE79262small Small Subset of GSE79262 Dataset From GEO
rrs.fit Fitting reduced-rank ridge regression with given rank and shrinkage penalty