EIC                     Extended Information Criterion (EIC) to compare
                        models fit with 'mvgls' by Maximum Likelihood
                        (ML) or Penalized Likelihood (PL).
GIC                     Generalized Information Criterion (GIC) to
                        compare models fit with 'mvgls' by Maximum
                        Likelihood (ML) or Penalized Likelihood (PL).
LRT                     Likelihood Ratio Test
aicw                    Akaike weights
coef.mvgls              Extract multivariate gls model coefficients
estim                   Ancestral states reconstructions and missing
                        value imputation with phylogenetic/time-series
                        models
fitted.mvgls            Extract multivariate gls model fitted values
halflife                The phylogenetic half-life for an
                        Ornstein-Uhlenbeck process
manova.gls              Multivariate Analysis of Variance
mv.Precalc              Model parameterization for the various mvMORPH
                        functions
mvBM                    Multivariate Brownian Motion models of
                        continuous traits evolution
mvEB                    Multivariate Early Burst model of continuous
                        traits evolution
mvLL                    Multivariate (and univariate) algorithms for
                        log-likelihood estimation of arbitrary
                        covariance matrix/trees
mvMORPH-package         Multivariate Comparative Methods for Fitting
                        Evolutionary Models to Morphometric Data
mvOU                    Multivariate Ornstein-Uhlenbeck model of
                        continuous traits evolution
mvOUTS                  Multivariate continuous trait evolution for a
                        stationary time series (Ornstein-Uhlenbeck
                        model)
mvRWTS                  Multivariate Brownian motion / Random Walk
                        model of continuous traits evolution on time
                        series
mvSHIFT                 Multivariate change in mode of continuous trait
                        evolution
mvSIM                   Simulation of (multivariate) continuous traits
                        on a phylogeny
mvgls                   Fit linear model using Generalized Least
                        Squares to multivariate (high-dimensional) data
                        sets.
mvgls.pca               Principal Component Analysis (PCA) based on GLS
                        estimate of the traits variance-covariance
                        matrix (possibly regularized).
phyllostomid            Phylogeny and trait data for a sample of
                        Phyllostomid bats
pruning                 Pruning algorithm to compute the square root of
                        the phylogenetic covariance matrix and it's
                        determinant.
residuals.mvgls         Extract gls model residuals
stationary              The stationary variance of an
                        Ornstein-Uhlenbeck process
vcov.mvgls              Calculate variance-covariance matrix for a
                        fitted object of class 'mvgls'
