NanoString Quality Control Dashboard


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Documentation for package ‘NACHO’ version 1.0.1

Help Pages

autoplot.nacho Plot quality-control metrics and thresholds of a "nacho" object
check_outliers Annotate a "nacho" object for outliers
deploy Deploy (copy) the shiny application to the specified directory
GSE74821 A "nacho" object containing 20 samples of GSE74821 dataset
load_rcc Produce a "nacho" object from RCC NanoString files
nacho_conflicts Conflicts between the NACHO and other packages
normalise (re)Normalise a "nacho" object
normalize (re)Normalise a "nacho" object
print.nacho Print method for "nacho" object
render Render a HTML report of a "nacho" object
summarize Produce a "nacho" object from RCC NanoString files
visualise Visualise quality-control metrics of a "nacho" object
visualize Visualise quality-control metrics of a "nacho" object