Mass Spectrometry Metabolomics Feature Clustering and Interpretation


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Documentation for package ‘RAMClustR’ version 1.0.9

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annotate evalute ramSearch, MSFinder mssearch, MSFinder Structure, MSFinder Formula, and findmain output to annotate spectra of ramclustR object
annotation.summary annotation.summary()
assign.z assign.z
change.annotation evalute ramSearch, MSFinder mssearch, MSFinder Structure, MSFinder Formula, and findmain output to annotate spectra of ramclustR object
defineExperiment defineExperiment
do.findmain do.findmain
export.msfinder.formulas export MSFinder formula prediction results in tabular format.
exportDataset exportDataset
findmass findmass
fooddb2msfinder foodb2msfinder
get.synonyms get.synonyms()
getClassyFire getClassyFire
getSmilesInchi getSmilesInchi
import.msfinder.formulas import.msfinder.formulas
import.msfinder.mssearch import.MSFinder.mssearch
import.msfinder.structures write.methods
impRamSearch impRamSearch
manual.annotation.template manual.annotation.template
mergeRCobjects mergeRCobjects
ramclustR ramclustR
RCQC RCQC
write.methods write.methods