# Generated by roxygen2: do not edit by hand

export(initialize_SNP_time_series)
export(sync_to_frequencies)
exportMethods(inspect_window)
exportMethods(inspect_window_PCA)
exportMethods(inspect_window_avLink)
exportMethods(inspect_window_dbScan)
exportMethods(map)
exportMethods(markers)
exportMethods(number_hbr)
exportMethods(plot)
exportMethods(plot_cluster_trajectories)
exportMethods(plot_hbr_freq)
exportMethods(plot_marker_trajectories)
exportMethods(reconstruct_hb)
exportMethods(rev_map)
exportMethods(show)
exportMethods(summary)
import(data.table)
import(foreach)
import(igraph)
importFrom(dbscan,dbscan)
importFrom(dbscan,kNNdistplot)
importFrom(gplots,heatmap.2)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,rainbow)
importFrom(graphics,abline)
importFrom(graphics,legend)
importFrom(graphics,lines)
importFrom(graphics,mtext)
importFrom(graphics,par)
importFrom(graphics,points)
importFrom(graphics,segments)
importFrom(graphics,text)
importFrom(matrixStats,rowRanks)
importFrom(methods,new)
importFrom(methods,show)
importFrom(stats,as.dist)
importFrom(stats,cor)
importFrom(stats,cutree)
importFrom(stats,hclust)
importFrom(stats,median)
importFrom(stats,na.omit)
importFrom(stats,prcomp)
importFrom(stats,rnorm)
importFrom(stringi,stri_split_fixed)
importFrom(utils,combn)
importFrom(utils,read.table)
importFrom(zoo,rollapply)
