# Visualise Clusterings at Different Resolutions

## Documentation for package ‘clustree’ version 0.4.2

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

clustree-package | Clustree
add_node_labels | Add node labels
add_node_points | Add node points
aggr_metadata | Aggregate metadata
assert_colour_node_aes | Assert colour node aesthetics
assert_node_aes | Assert node aesthetics
assert_numeric_node_aes | Assert numeric node aesthetics
build_tree_graph | Build tree graph
calc_sc3_stability | Calculate SC3 stability
calc_sc3_stability_cluster | Calculate single SC3 stability
check_node_aes_list | Check node aes list
clustree | Plot a clustering tree
clustree.data.frame | Plot a clustering tree
clustree.matrix | Plot a clustering tree
clustree.Seurat | Plot a clustering tree
clustree.seurat | Plot a clustering tree
clustree.SingleCellExperiment | Plot a clustering tree
clustree_overlay | Overlay a clustering tree
clustree_overlay.data.frame | Overlay a clustering tree
clustree_overlay.matrix | Overlay a clustering tree
clustree_overlay.Seurat | Overlay a clustering tree
clustree_overlay.seurat | Overlay a clustering tree
clustree_overlay.SingleCellExperiment | Overlay a clustering tree
get_tree_edges | Get tree edges
get_tree_nodes | Get tree nodes
iris_clusts | Clustered Iris dataset
overlay_node_points | Overlay node points
plot_overlay_side | Plot overlay side
sc_example | Simulated scRNA-seq dataset
store_node_aes | Store node aesthetics