# A Shiny App for UCSC Xena Database

## Documentation for package ‘UCSCXenaShiny’ version 0.4.0

- DESCRIPTION file.

## Help Pages

UCSCXenaShiny-package | Xena Shiny App
app_run | Run Xena Shiny App
available_hosts | Show available hosts
dat_datasets | Number of datasets in each cohort
dat_samples | Number of samples in each cohort
get_pancan_gene_value | Fetch identifier value from pan-cancer dataset
get_pancan_value | Fetch identifier value from pan-cancer dataset
ope_toil_gene | Obtain toilHub info for single gene
tcga_gtex | Toil Hub: merged TCGA GTEX selected phenotypes
toil_info | Toil Hub: TCGA TARGET GTEX selected phenotypes
toil_surv | Toil Hub: TCGA survival data
UCSCXenaShiny | Xena Shiny App
vis_toil_gene | Visualize single gene expression from toil data hub
vis_toil_TvsN | Visualize single gene expression from toil data hub
XenaInfo | Summary info of UCSC Xena