# Network Comparison Based on Structural Equivalence and Graphlets

## Documentation for package ‘NetworkSim’ version 0.1.0

- DESCRIPTION file.

## Help Pages

ADE2CAR.DEGs | DEGs of the adenoma-carcinoma transition
ADE2CAR.net | PPI network of ADE2CAR.DEGs
databases.net | integrated PPI network
netGDD | Calculate the Graphlet degree distribution (GDD) agreement between two networks
netSE | Calculate the structural equivalence between two networks
nodesCom | Get the common nodes from two networks
NOR2ADE.DEGs | DEGs between colonic normals and adenomas
NOR2ADE.net | PPI network of NOR2ADE.DEGs
subnet | Subnetwork from a network