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@PhdThesis{zhang2014nonparametric,
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@PhdThesis{nguyen2018modelfree,
  author = {Hien H. Nguyen},
  year = "2018",
  title = "Inference of Functional Dependency via Asymmetric, Optimal, and Model-free Statistics",
  school = "Department of Computer Science, New Mexico State University",
  address = {Las Cruces, NM, USA}
}

@PhdThesis{zhong2019modelfree,
  author = {Hua Zhong},
  year = "2019",
  title ="Model-free Gene-to-zone Network Inference of Molecular Mechanisms in Biology",
  school = "Department of Computer Science, New Mexico State University",
  address = {Las Cruces, NM, USA}
}

@Article{zhong2019eft,
  title = "A fast exact functional test for directional association and cancer biology applications",
  journal = "IEEE/ACM Transactions on Computational Biology and Bioinformatics",
  year = "2019a",
  volume = "16",
  number = "3",
  pages = "818--826",
  author = {Hua Zhong and Mingzhou Song},
  doi = "10.1109/TCBB.2018.2809743"
}

@Article{song2014hunting,
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  pages = "e57",
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}

@Article{zhang2015chinet,
  title = "{ChiNet} uncovers rewired transcription subnetworks in tolerant yeast for advanced biofuels conversion",
  journal = "Nucleic Acids Research",
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  pages = "4393--4407",
  author = {Yang Zhang and Z Lewis Liu and Mingzhou Song},
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}

@Article{sharma2017simulating,
  title = "Simulating noisy, nonparametric, and multivariate discrete patterns",
  journal = "The R Journal",
  year = "2017",
  volume = "9",
  number = "2",
  pages = "366--377",
  author = {Ruby Sharma and Sajal Kumar and Hua Zhong and Mingzhou Song},
  doi = {10.32614/RJ-2017-053}
}

@inproceedings{KumarZSLS18,
	Address = {Madrid, Spain},
	Author = {Sajal Kumar and Hua Zhong and Ruby Sharma and Yiyi Li and Mingzhou Song},
	Booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine},
	Doi = {10.1109/BIBM.2018.8621502},
	Pages = {185--190},
	Title = {Scrutinizing functional interaction networks from {RNA}-binding proteins to their targets in cancer},
	Year = {2018}
}

@article{Zhong2019FANTOM5,
	Author = {Hua Zhong and Mingzhou Song},
	Doi = {10.1186/s12920-019-0565-9},
	Journal = {BMC Med Genomics},
	Number = {7},
	Pages = {129},
	Title = {Directional association test reveals high-quality putative cancer driver biomarkers including noncoding {RNA}s},
	Volume = {12},
	Year = {2019b}
}

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	Journal = {Nat Methods},
	Pages = {310--318},
	Title = {Inferring causal molecular networks: empirical assessment through a community-based effort.},
	Volume = {13},
	Year = {2016},
	Doi = {10.1038/nmeth.3773}
}

@Article{Simon1966,
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}
