AMR                     The 'AMR' Package
WHOCC                   WHOCC: WHO Collaborating Centre for Drug
                        Statistics Methodology
WHONET                  Data set with 500 isolates - WHONET example
ab_property             Property of an antibiotic
age                     Age in years of individuals
age_groups              Split ages into age groups
antibiotics             Data sets with 557 antimicrobials
as.ab                   Transform to antibiotic ID
as.disk                 Class 'disk'
as.mic                  Class 'mic'
as.mo                   Transform to microorganism ID
as.rsi                  Class 'rsi'
atc_online_property     Get ATC properties from WHOCC website
availability            Check availability of columns
bug_drug_combinations   Determine bug-drug combinations
catalogue_of_life       The Catalogue of Life
catalogue_of_life_version
                        Version info of included Catalogue of Life
count                   Count available isolates
eucast_rules            Apply EUCAST rules
example_isolates        Data set with 2,000 example isolates
example_isolates_unclean
                        Data set with unclean data
filter_ab_class         Filter isolates on result in antibiotic class
first_isolate           Determine first (weighted) isolates
g.test                  _G_-test for Count Data
ggplot_pca              PCA biplot with 'ggplot2'
ggplot_rsi              AMR plots with 'ggplot2'
guess_ab_col            Guess antibiotic column
join                    Join a table with microorganisms
key_antibiotics         Key antibiotics for first _weighted_ isolates
kurtosis                Kurtosis of the sample
lifecycle               Lifecycles of functions in the 'AMR' package
like                    Pattern Matching
mdro                    Determine multidrug-resistant organisms (MDRO)
microorganisms          Data set with 69,447 microorganisms
microorganisms.codes    Translation table for common microorganism
                        codes
microorganisms.old      Data set with previously accepted taxonomic
                        names
mo_property             Property of a microorganism
mo_source               Use predefined reference data set
p_symbol                Symbol of a p-value
pca                     Principal Component Analysis (for AMR)
proportion              Calculate microbial resistance
read.4D                 Read data from 4D database
resistance_predict      Predict antimicrobial resistance
rsi_translation         Data set for R/SI interpretation
skewness                Skewness of the sample
translate               Translate strings from AMR package
