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| trialr-package | The 'trialr' package. |
| as.data.frame.crm_fit | Convert crm_fit object to 'data.frame'. |
| as.data.frame.efftox_fit | Convert efftox_fit object to 'data.frame'. |
| crm_fit | Class of model fit by 'trialr' using the CRM dose-finding design. |
| crm_fit-class | Class of model fit by 'trialr' using the CRM dose-finding design. |
| crm_params | Container class for parameters to fit the CRM models in trialr. |
| crm_params-class | Container class for parameters to fit the CRM models in trialr. |
| crm_process | Process RStan samples from a CRM model |
| df_parse_outcomes | Parse a string of dose-finding trial outcomes to binary vector notation. |
| efftox_analysis_to_df | EffTox analysis to data.frame |
| efftox_contour_plot | Plot EffTox utility contours |
| efftox_dtps | Calculate dose-transition pathways for an EffTox study |
| efftox_fit | Class of model fit by 'trialr' using the EffTox dose-finding design. |
| efftox_fit-class | Class of model fit by 'trialr' using the EffTox dose-finding design. |
| efftox_get_tox | Get the Prob(Tox) for Prob(Eff) and utility pairs |
| efftox_parameters_demo | Get parameters to run the EffTox demo |
| efftox_params | Container class for parameters to fit the EffTox model in trialr. |
| efftox_params-class | Container class for parameters to fit the EffTox model in trialr. |
| efftox_parse_outcomes | Parse a string of EffTox outcomes to binary vector notation. |
| efftox_process | Process RStan samples from an EffTox model |
| efftox_simulate | Run EffTox simulations |
| efftox_solve_p | Calculate the p-index for EffTox utility contours |
| efftox_superiority | Get dose-superiority matrix in EffTox |
| efftox_utility | Get the utility of efficacy & toxicity probability pairs |
| efftox_utility_density_plot | Plot densities of EffTox dose utilities |
| parse_dose_finding_outcomes | Parse a string of dose-finding trial outcomes. |
| peps2_get_data | Get data to run the PePS2 trial example |
| peps2_process | Process RStan samples from a BEBOP model fit to PePS2 data |
| plot.crm_fit | Plot an crm_fit |
| plot.efftox_fit | Plot an efftox_fit |
| print.crm_fit | Print crm_fit object. |
| print.efftox_fit | Print efftox_fit object. |
| ranBin2 | Sample pairs of correlated binary events |
| stan_crm | Fit a CRM model |
| stan_efftox | Fit an EffTox model |
| stan_efftox_demo | Fit the EffTox model presented in Thall et al. (2014) |
| stan_hierarchical_response_thall | Fit the hierarchical response model described by Thall _et al._ (2003). |
| stan_peps2 | Fit the P2TNE model developed for the PePS2 trial to some outcomes. |
| summary.crm_fit | Obtain summary of an crm_fit |
| summary.efftox_fit | Obtain summary of an efftox_fit |
| trialr | The 'trialr' package. |