Package: metaboGSE
Type: Package
Title: Gene Set Enrichment Analysis via Integration of Metabolic
        Networks and RNA-Seq Data
Version: 1.2.1
Depends: R (>= 3.4.0), sybil (>= 2.0.4), AnnotationDbi (>= 1.32.3), ape
        (>= 3.3), topGO (>= 2.24.0)
Suggests: glpkAPI (>= 1.3.0), clpAPI (>= 1.2.7), KernSmooth, KEGGREST,
        survival, ctc, knitr, rmarkdown
Imports: utils, stats, methods, parallel, grDevices, graphics, Matrix,
        sys
Packaged: 2018-12-12 09:33:23 UTC; ttran
Author: Van Du T. Tran [aut, cre], Marco Pagni [aut]
Maintainer: Van Du T. Tran <thuong.tran@sib.swiss>
Description: Integrates metabolic networks and RNA-seq data to construct condition-specific series of metabolic sub-networks and applies to gene set enrichment analysis (Tran et al. (2018) <doi:10.1093/bioinformatics/bty929>).
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.0
VignetteBuilder: knitr
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2018-12-12 15:10:03 UTC
Built: R 3.4.4; ; 2019-04-25 20:26:36 UTC; windows
