galgo-package	galgo-package
activeChromosomeSet	activeChromosomeSet.BigBang
activeChromosomeSet,BigBang-method	activeChromosomeSet.BigBang
activeChromosomeSet.BigBang	activeChromosomeSet.BigBang
addCount	addCount.BigBang
addCount,BigBang-method	addCount.BigBang
addCount.BigBang	addCount.BigBang
addRandomSolutions	addRandomSolutions.BigBang
addRandomSolutions,BigBang-method	addRandomSolutions.BigBang
addRandomSolutions.BigBang	addRandomSolutions.BigBang
addSolutions	addSolutions.BigBang
addSolutions,BigBang-method	addSolutions.BigBang
addSolutions.BigBang	addSolutions.BigBang
ALL	ALL
ALL.classes	ALL.classes
as.double,Chromosome-method	as.double.Chromosome
as.double,Gene-method	as.double.Gene
as.double,Niche-method	as.double.Niche
as.double.Chromosome	as.double.Chromosome
as.double.Gene	as.double.Gene
as.double.Niche	as.double.Niche
as.list	as.list.Object
as.list.Object	as.list.Object
as.matrix,BigBang-method	as.matrix.BigBang
as.matrix,Gene-method	as.matrix.Gene
as.matrix,Niche-method	as.matrix.Niche
as.matrix.BigBang	as.matrix.BigBang
as.matrix.Gene	as.matrix.Gene
as.matrix.Niche	as.matrix.Niche
assignParallelFile	assignParallelFile.BigBang
assignParallelFile,BigBang-method	assignParallelFile.BigBang
assignParallelFile.BigBang	assignParallelFile.BigBang
Bag	Bag
Bag.length	length.Bag
Bag.print	print.Bag
Bag.summary	summary.Bag
best	best.Galgo
best,Galgo-method	best.Galgo
best,Niche-method	best.Niche
best,World-method	best.World
best.Galgo	best.Galgo
best.Niche	best.Niche
best.World	best.World
bestFitness	bestFitness.Galgo
bestFitness,Galgo-method	bestFitness.Galgo
bestFitness,Niche-method	bestFitness.Niche
bestFitness,World-method	bestFitness.World
bestFitness.Galgo	bestFitness.Galgo
bestFitness.Niche	bestFitness.Niche
bestFitness.World	bestFitness.World
BigBang	BigBang
BigBang.activeChromosomeSet	activeChromosomeSet.BigBang
BigBang.addCount	addCount.BigBang
BigBang.addRandomSolutions	addRandomSolutions.BigBang
BigBang.addSolutions	addSolutions.BigBang
BigBang.as.matrix	as.matrix.BigBang
BigBang.assignParallelFile	assignParallelFile.BigBang
BigBang.blast	blast.BigBang
BigBang.buildCount	buildCount.BigBang
BigBang.classPredictionMatrix	classPredictionMatrix.BigBang
BigBang.computeCount	computeCount.BigBang
BigBang.confusionMatrix	confusionMatrix.BigBang
BigBang.distanceImportanceNetwork	distanceImportanceNetwork.BigBang
BigBang.filterSolution	filterSolution.BigBang
BigBang.fitnessSplits	fitnessSplits.BigBang
BigBang.formatChromosome	formatChromosome.BigBang
BigBang.forwardSelectionModels	forwardSelectionModels.BigBang
BigBang.geneCoverage	geneCoverage.BigBang
BigBang.geneFrequency	geneFrequency.BigBang
BigBang.geneImportanceNetwork	geneImportanceNetwork.BigBang
BigBang.geneRankStability	geneRankStability.BigBang
BigBang.getFrequencies	getFrequencies.BigBang
BigBang.heatmapModels	heatmapModels.BigBang
BigBang.loadParallelFiles	loadParallelFiles.BigBang
BigBang.meanFitness	meanFitness.BigBang
BigBang.meanGeneration	meanGeneration.BigBang
BigBang.mergeBangs	mergeBangs.BigBang
BigBang.pcaModels	pcaModels.BigBang
BigBang.plot	plot.BigBang
BigBang.predict	predict.BigBang
BigBang.print	print.BigBang
BigBang.saveObject	saveObject.BigBang
BigBang.sensitivityClass	sensitivityClass.BigBang
BigBang.specificityClass	specificityClass.BigBang
BigBang.summary	summary.BigBang
blast	blast.BigBang
blast,BigBang-method	blast.BigBang
blast.BigBang	blast.BigBang
buildCount	buildCount.BigBang
buildCount,BigBang-method	buildCount.BigBang
buildCount.BigBang	buildCount.BigBang
Chromosome	Chromosome
Chromosome.as.double	as.double.Chromosome
Chromosome.clone	clone.Chromosome
Chromosome.decode	decode.Chromosome
Chromosome.generateRandom	generateRandom.Chromosome
Chromosome.genes	genes.Chromosome
Chromosome.length	length.Chromosome
Chromosome.mutate	mutate.Chromosome
Chromosome.newCollection	newCollection.Chromosome
Chromosome.newRandomCollection	newRandomCollection.Chromosome
Chromosome.print	print.Chromosome
Chromosome.reInit	reInit.Chromosome
Chromosome.summary	summary.Chromosome
classPrediction	classPrediction
classPredictionMatrix	classPredictionMatrix.BigBang
classPredictionMatrix,BigBang-method	classPredictionMatrix.BigBang
classPredictionMatrix.BigBang	classPredictionMatrix.BigBang
clone	clone.Galgo
clone,Chromosome-method	clone.Chromosome
clone,Galgo-method	clone.Galgo
clone,Niche-method	clone.Niche
clone,World-method	clone.World
clone.Chromosome	clone.Chromosome
clone.Galgo	clone.Galgo
clone.Niche	clone.Niche
clone.World	clone.World
computeCount	computeCount.BigBang
computeCount,BigBang-method	computeCount.BigBang
computeCount.BigBang	computeCount.BigBang
configBB.VarSel	configBB.VarSel
configBB.VarSelMisc	configBB.VarSelMisc
confusionMatrix	confusionMatrix.BigBang
confusionMatrix,BigBang-method	confusionMatrix.BigBang
confusionMatrix.BigBang	confusionMatrix.BigBang
crossover	crossover.Niche
crossover,Niche-method	crossover.Niche
crossover.Niche	crossover.Niche
decode	decode.Chromosome
decode,Chromosome-method	decode.Chromosome
decode.Chromosome	decode.Chromosome
distanceImportanceNetwork	distanceImportanceNetwork.BigBang
distanceImportanceNetwork,BigBang-method	distanceImportanceNetwork.BigBang
distanceImportanceNetwork.BigBang	distanceImportanceNetwork.BigBang
evaluate	evaluate.Galgo
evaluate,Galgo-method	evaluate.Galgo
evaluate,Niche-method	evaluate.Niche
evaluate,World-method	evaluate.World
evaluate.Galgo	evaluate.Galgo
evaluate.Niche	evaluate.Niche
evaluate.World	evaluate.World
evolve	evolve.Galgo
evolve,Galgo-method	evolve.Galgo
evolve.Galgo	evolve.Galgo
filterSolution	filterSolution.BigBang
filterSolution,BigBang-method	filterSolution.BigBang
filterSolution.BigBang	filterSolution.BigBang
fitness	fitness
fitnessSplits	fitnessSplits.BigBang
fitnessSplits,BigBang-method	fitnessSplits.BigBang
fitnessSplits.BigBang	fitnessSplits.BigBang
formatChromosome	formatChromosome.BigBang
formatChromosome,BigBang-method	formatChromosome.BigBang
formatChromosome.BigBang	formatChromosome.BigBang
forwardSelectionModels	forwardSelectionModels.BigBang
forwardSelectionModels,BigBang-method	forwardSelectionModels.BigBang
forwardSelectionModels.BigBang	forwardSelectionModels.BigBang
Galgo	Galgo
galgo	galgo-package
Galgo.best	best.Galgo
Galgo.bestFitness	bestFitness.Galgo
Galgo.clone	clone.Galgo
galgo.dist	galgo.dist
Galgo.evaluate	evaluate.Galgo
Galgo.evolve	evolve.Galgo
Galgo.generateRandom	generateRandom.Galgo
Galgo.length	length.Galgo
Galgo.max	max.Galgo
Galgo.maxFitness	maxFitness.Galgo
Galgo.plot	plot.Galgo
Galgo.print	print.Galgo
Galgo.refreshStats	refreshStats.Galgo
Galgo.reInit	reInit.Galgo
Galgo.summary	summary.Galgo
Gene	Gene
Gene.as.double	as.double.Gene
Gene.as.matrix	as.matrix.Gene
Gene.generateRandom	generateRandom.Gene
Gene.mutate	mutate.Gene
Gene.newCollection	newCollection.Gene
Gene.newRandomCollection	newRandomCollection.Gene
Gene.print	print.Gene
Gene.reInit	reInit.Gene
Gene.summary	summary.Gene
geneBackwardElimination	geneBackwardElimination
geneCoverage	geneCoverage.BigBang
geneCoverage,BigBang-method	geneCoverage.BigBang
geneCoverage.BigBang	geneCoverage.BigBang
geneFrequency	geneFrequency.BigBang
geneFrequency,BigBang-method	geneFrequency.BigBang
geneFrequency.BigBang	geneFrequency.BigBang
geneImportanceNetwork	geneImportanceNetwork.BigBang
geneImportanceNetwork,BigBang-method	geneImportanceNetwork.BigBang
geneImportanceNetwork.BigBang	geneImportanceNetwork.BigBang
geneRankStability	geneRankStability.BigBang
geneRankStability,BigBang-method	geneRankStability.BigBang
geneRankStability.BigBang	geneRankStability.BigBang
generateRandom	generateRandom.Galgo
generateRandom,Chromosome-method	generateRandom.Chromosome
generateRandom,Galgo-method	generateRandom.Galgo
generateRandom,Gene-method	generateRandom.Gene
generateRandom,Niche-method	generateRandom.Niche
generateRandom,World-method	generateRandom.World
generateRandom.Chromosome	generateRandom.Chromosome
generateRandom.Galgo	generateRandom.Galgo
generateRandom.Gene	generateRandom.Gene
generateRandom.Niche	generateRandom.Niche
generateRandom.World	generateRandom.World
generateRandomModels	generateRandomModels
genes	genes.Chromosome
genes,Chromosome-method	genes.Chromosome
genes.Chromosome	genes.Chromosome
getFitness	getFitness.Niche
getFitness,Niche-method	getFitness.Niche
getFitness.Niche	getFitness.Niche
getFrequencies	getFrequencies.BigBang
getFrequencies,BigBang-method	getFrequencies.BigBang
getFrequencies.BigBang	getFrequencies.BigBang
heatmapModels	heatmapModels.BigBang
heatmapModels,BigBang-method	heatmapModels.BigBang
heatmapModels.BigBang	heatmapModels.BigBang
knn_C_predict	knn_C_predict
knn_R_predict	knn_R_predict
length	length.Galgo
length,Bag-method	length.Bag
length,Chromosome-method	length.Chromosome
length,Galgo-method	length.Galgo
length,Niche-method	length.Niche
length,World-method	length.World
length.Bag	length.Bag
length.Chromosome	length.Chromosome
length.Galgo	length.Galgo
length.Niche	length.Niche
length.World	length.World
loadObject	loadObject
loadParallelFiles	loadParallelFiles.BigBang
loadParallelFiles,BigBang-method	loadParallelFiles.BigBang
loadParallelFiles.BigBang	loadParallelFiles.BigBang
max	max.Galgo
max,Galgo-method	max.Galgo
max,Niche-method	max.Niche
max,World-method	max.World
max.Galgo	max.Galgo
max.Niche	max.Niche
max.World	max.World
maxFitness	maxFitness.Galgo
maxFitness,Galgo-method	maxFitness.Galgo
maxFitness,Niche-method	maxFitness.Niche
maxFitness,World-method	maxFitness.World
maxFitness.Galgo	maxFitness.Galgo
maxFitness.Niche	maxFitness.Niche
maxFitness.World	maxFitness.World
meanFitness	meanFitness.BigBang
meanFitness,BigBang-method	meanFitness.BigBang
meanFitness.BigBang	meanFitness.BigBang
meanGeneration	meanGeneration.BigBang
meanGeneration,BigBang-method	meanGeneration.BigBang
meanGeneration.BigBang	meanGeneration.BigBang
mergeBangs	mergeBangs.BigBang
mergeBangs,BigBang-method	mergeBangs.BigBang
mergeBangs.BigBang	mergeBangs.BigBang
mlhd_C_predict	mlhd_C_predict
mlhd_R_predict	mlhd_R_predict
modelSelection	modelSelection
mutate	mutate.Gene
mutate,Chromosome-method	mutate.Chromosome
mutate,Gene-method	mutate.Gene
mutate,Niche-method	mutate.Niche
mutate.Chromosome	mutate.Chromosome
mutate.Gene	mutate.Gene
mutate.Niche	mutate.Niche
nearcent_C_predict	nearcent_C_predict
nearcent_R_predict	nearcent_R_predict
newCollection	newCollection.World
newCollection,Chromosome-method	newCollection.Chromosome
newCollection,Gene-method	newCollection.Gene
newCollection,Niche-method	newCollection.Niche
newCollection,World-method	newCollection.World
newCollection.Chromosome	newCollection.Chromosome
newCollection.Gene	newCollection.Gene
newCollection.Niche	newCollection.Niche
newCollection.World	newCollection.World
newRandomCollection	newRandomCollection.World
newRandomCollection,Chromosome-method	newRandomCollection.Chromosome
newRandomCollection,Gene-method	newRandomCollection.Gene
newRandomCollection,Niche-method	newRandomCollection.Niche
newRandomCollection,World-method	newRandomCollection.World
newRandomCollection.Chromosome	newRandomCollection.Chromosome
newRandomCollection.Gene	newRandomCollection.Gene
newRandomCollection.Niche	newRandomCollection.Niche
newRandomCollection.World	newRandomCollection.World
Niche	Niche
Niche.as.double	as.double.Niche
Niche.as.matrix	as.matrix.Niche
Niche.best	best.Niche
Niche.bestFitness	bestFitness.Niche
Niche.clone	clone.Niche
Niche.crossover	crossover.Niche
Niche.evaluate	evaluate.Niche
Niche.generateRandom	generateRandom.Niche
Niche.getFitness	getFitness.Niche
Niche.length	length.Niche
Niche.max	max.Niche
Niche.maxFitness	maxFitness.Niche
Niche.mutate	mutate.Niche
Niche.newCollection	newCollection.Niche
Niche.newRandomCollection	newRandomCollection.Niche
Niche.offspring	offspring.Niche
Niche.plot	plot.Niche
Niche.print	print.Niche
Niche.progeny	progeny.Niche
Niche.refreshStats	refreshStats.Niche
Niche.reInit	reInit.Niche
Niche.scaling	scaling.Niche
Niche.summary	summary.Niche
nnet_R_predict	nnet_R_predict
offspring	offspring.Niche
offspring,Niche-method	offspring.Niche
offspring.Niche	offspring.Niche
pcaModels	pcaModels.BigBang
pcaModels,BigBang-method	pcaModels.BigBang
pcaModels.BigBang	pcaModels.BigBang
plot,BigBang-method	plot.BigBang
plot,Galgo-method	plot.Galgo
plot,Niche-method	plot.Niche
plot,World-method	plot.World
plot.BigBang	plot.BigBang
plot.Galgo	plot.Galgo
plot.Niche	plot.Niche
plot.World	plot.World
predict	predict.BigBang
predict,BigBang-method	predict.BigBang
predict.BigBang	predict.BigBang
print	print.BigBang
print,Bag-method	print.Bag
print,BigBang-method	print.BigBang
print,Chromosome-method	print.Chromosome
print,Galgo-method	print.Galgo
print,Gene-method	print.Gene
print,Niche-method	print.Niche
print,World-method	print.World
print.Bag	print.Bag
print.BigBang	print.BigBang
print.Chromosome	print.Chromosome
print.Galgo	print.Galgo
print.Gene	print.Gene
print.Niche	print.Niche
print.World	print.World
progeny	progeny.World
progeny,Niche-method	progeny.Niche
progeny,World-method	progeny.World
progeny.Niche	progeny.Niche
progeny.World	progeny.World
randomforest_R_predict	randomforest_R_predict
refreshStats	refreshStats.Galgo
refreshStats,Galgo-method	refreshStats.Galgo
refreshStats,Niche-method	refreshStats.Niche
refreshStats,World-method	refreshStats.World
refreshStats.Galgo	refreshStats.Galgo
refreshStats.Niche	refreshStats.Niche
refreshStats.World	refreshStats.World
reInit	reInit.Galgo
reInit,Chromosome-method	reInit.Chromosome
reInit,Galgo-method	reInit.Galgo
reInit,Gene-method	reInit.Gene
reInit,Niche-method	reInit.Niche
reInit,World-method	reInit.World
reInit.Chromosome	reInit.Chromosome
reInit.Galgo	reInit.Galgo
reInit.Gene	reInit.Gene
reInit.Niche	reInit.Niche
reInit.World	reInit.World
reObject	reObject
robustGeneBackwardElimination	robustGeneBackwardElimination
rpart_R_predict	rpart_R_predict
runifInt	runifInt
saveObject	saveObject.BigBang
saveObject,BigBang-method	saveObject.BigBang
saveObject.BigBang	saveObject.BigBang
scaling	scaling.Niche
scaling,Niche-method	scaling.Niche
scaling.Niche	scaling.Niche
sensitivityClass	sensitivityClass.BigBang
sensitivityClass,BigBang-method	sensitivityClass.BigBang
sensitivityClass.BigBang	sensitivityClass.BigBang
specificityClass	specificityClass.BigBang
specificityClass,BigBang-method	specificityClass.BigBang
specificityClass.BigBang	specificityClass.BigBang
summary	summary.BigBang
summary,Bag-method	summary.Bag
summary,BigBang-method	summary.BigBang
summary,Chromosome-method	summary.Chromosome
summary,Galgo-method	summary.Galgo
summary,Gene-method	summary.Gene
summary,Niche-method	summary.Niche
summary,World-method	summary.World
summary.Bag	summary.Bag
summary.BigBang	summary.BigBang
summary.Chromosome	summary.Chromosome
summary.Galgo	summary.Galgo
summary.Gene	summary.Gene
summary.Niche	summary.Niche
summary.World	summary.World
svm_C_predict	svm_C_predict
svm_R_predict	svm_R_predict
unObject	unObject.Object
unObject.list	unObject.Object
unObject.Object	unObject.Object
World	World
World.best	best.World
World.bestFitness	bestFitness.World
World.clone	clone.World
World.evaluate	evaluate.World
World.generateRandom	generateRandom.World
World.length	length.World
World.max	max.World
World.maxFitness	maxFitness.World
World.newCollection	newCollection.World
World.newRandomCollection	newRandomCollection.World
World.plot	plot.World
World.print	print.World
World.progeny	progeny.World
World.refreshStats	refreshStats.World
World.reInit	reInit.World
World.summary	summary.World
