castor-package	castor
asr_empirical_probabilities	asr_empirical_probabilities
asr_independent_contrasts	asr_independent_contrasts
asr_max_parsimony	asr_max_parsimony
asr_mk_model	asr_mk_model
asr_squared_change_parsimony	asr_squared_change_parsimony
asr_subtree_averaging	asr_subtree_averaging
castor	castor
collapse_monofurcations	collapse_monofurcations
collapse_tree_at_resolution	collapse_tree_at_resolution
congruent_divergence_times	congruent_divergence_times
count_clades_over_time	count_clades_over_time
count_tips_per_node	count_tips_per_node
date_tree_red	date_tree_red
exponentiate_matrix	exponentiate_matrix
extend_tree_to_height	extend_tree_to_height
find_farthest_tips	find_farthest_tips
find_nearest_tips	find_nearest_tips
find_root	find_root
find_root_of_monophyletic_tips	find_root_of_monophyletic_tips
fit_bm_model	fit_bm_model
fit_musse	fit_musse
fit_tree_model	fit_tree_model
generate_random_tree	generate_random_tree
generate_tree_with_evolving_rates	generate_tree_with_evolving_rates
get_all_distances_to_root	get_all_distances_to_root
get_all_node_depths	get_all_node_depths
get_independent_contrasts	get_independent_contrasts
get_mrca_of_set	get_mrca_of_set
get_pairwise_distances	get_pairwise_distances
get_pairwise_mrcas	get_pairwise_mrcas
get_random_diffusivity_matrix	get_random_diffusivity_matrix
get_random_mk_transition_matrix	get_random_mk_transition_matrix
get_reds	get_reds
get_stationary_distribution	get_stationary_distribution
get_subtree_at_node	get_subtree_at_node
get_subtree_with_tips	get_subtree_with_tips
get_tips_for_mrcas	get_tips_for_mrcas
get_trait_acf	get_trait_acf
get_trait_depth	get_trait_depth
get_trait_stats_over_time	get_trait_stats_over_time
get_transition_index_matrix	get_transition_index_matrix
get_tree_span	get_tree_span
get_tree_traversal_root_to_tips	get_tree_traversal_root_to_tips
hsp_empirical_probabilities	hsp_empirical_probabilities
hsp_independent_contrasts	hsp_independent_contrasts
hsp_max_parsimony	hsp_max_parsimony
hsp_mk_model	hsp_mk_model
hsp_squared_change_parsimony	hsp_squared_change_parsimony
hsp_subtree_averaging	hsp_subtree_averaging
is_monophyletic	is_monophyletic
map_to_state_space	map_to_state_space
merge_short_edges	merge_short_edges
multifurcations_to_bifurcations	multifurcations_to_bifurcations
pick_random_tips	pick_random_tips
read_tree	read_tree
reconstruct_past_diversification	reconstruct_past_diversification
reorder_tree_edges	reorder_tree_edges
root_at_midpoint	root_at_midpoint
root_at_node	root_at_node
root_in_edge	root_in_edge
root_via_outgroup	root_via_outgroup
simulate_bm_model	simulate_bm_model
simulate_diversification_model	simulate_diversification_model
simulate_mk_model	simulate_mk_model
simulate_musse	simulate_musse
simulate_ou_model	simulate_ou_model
simulate_rou_model	simulate_rou_model
tree_distance	tree_distance
trim_tree_at_height	trim_tree_at_height
write_tree	write_tree
