Package: biofiles
Type: Package
Title: An Interface for GenBank/GenPept Flat Files
Version: 1.0.0
Author: Gerhard Schöfl [aut, cre]
Maintainer: Gerhard Schöfl <gerhard.schofl@gmail.com>
Description: Parse GenBank/GenPept records <https://www.ncbi.nlm.nih.gov/Sitemap/samplerecord.html>
    into native R objects to easily access and manipulate the sequence and annotation information.
Depends: R (>= 3.3.1), Rcpp (>= 0.11.0)
LinkingTo: Rcpp (>= 0.11.0)
Imports: assertthat, BiocGenerics, Biostrings, foreach, GenomeInfoDb,
        GenomicRanges, IRanges, iterators, methods, parallel, RCurl,
        reutils, stats, S4Vectors, XVector
Suggests: doParallel, testthat, BiocStyle, knitr, covr
License: MIT + file LICENSE
Encoding: UTF-8
URL: https://github.com/gschofl/biofiles
BugReports: https://github.com/gschofl/biofiles/issues
Collate: 'RcppExports.R' 'utils.R' 'all-generics.R'
        'biofiles-package.R' 'filter.R' 'flanking.R' 'gbHeader-class.R'
        'gbLocation-class.R' 'gbFeature-class.R'
        'gbFeatureTable-class.R' 'gbRecord-class.R'
        'gbRecordList-class.R' 'genome-record-from-ncbi.R'
        'make-ranges.R' 'misc-functions.R' 'parser-general.R'
        'parser-embl.R' 'parser-gbk.R' 'select.R' 'shift.R'
        'write-feature-table.R' 'write-genbank.R' 'zzz.R'
VignetteBuilder: knitr
RoxygenNote: 6.0.1
NeedsCompilation: yes
Packaged: 2017-11-21 12:39:16 UTC; gerhard
Repository: CRAN
Date/Publication: 2017-11-21 18:16:48 UTC
Built: R 3.4.4; x86_64-w64-mingw32; 2019-04-25 21:36:37 UTC; windows
Archs: i386, x64
