biofiles-package	biofiles
$,gbFeature-method	extract-methods
.filter	dot-filter
.gbHeader	gbHeader-class
.gbLocus	gbLocus-class
.gbReference	gbReference-class
.gbReferenceList	gbReferenceList-class
.select	dot-select
as.gbLocation	as.gbLocation
biofiles	biofiles
dbxref	dbxref-methods
dbxref,gbFeature-method	dbxref-methods
dbxref,gbFeatureTable-method	dbxref-methods
dbxref,gbRecord-method	dbxref-methods
downstream	upstream
embl_record	embl_record
end	end
end,gbFeature-method	end
end,gbFeatureTable-method	end
end,gbLocation-method	end
end,gbRecord-method	end
end,gbRecordList-method	end
end<-	end
end<-,gbFeature-method	end
end<-,gbFeatureTable-method	end
end<-,gbLocation-method	end
featureTable	featureTable-methods
featureTable,gbFeatureTable-method	featureTable-methods
featureTable,gbRecord-method	featureTable-methods
featureTable,gbRecordList-method	featureTable-methods
filter	manip-methods
filter,gbFeatureTable-method	manip-methods
filter,gbRecord-method	manip-methods
filter,gbRecordList-method	manip-methods
flanking	upstream
ft	getFeatures-methods
ft,gbRecord-method	getFeatures-methods
ft,gbRecordList-method	getFeatures-methods
fuzzy	fuzzy
fuzzy,gbFeature-method	fuzzy
fuzzy,gbFeatureTable-method	fuzzy
fuzzy,gbLocation-method	fuzzy
fuzzy,gbRecord-method	fuzzy
fuzzy,gbRecordList-method	fuzzy
gbFeature-class	gbFeature-class
gbFeatureTable-class	gbFeatureTable-class
gbHeader-class	gbHeader-class
gbk_record	gbk_record
gbLocation-class	gbLocation-class
gbLocus-class	gbLocus-class
gbRecord	gbRecord
gbRecord-class	gbRecord-class
gbRecordList	gbRecordList-class
gbRecordList-class	gbRecordList-class
gbReference-class	gbReference-class
gbReferenceList-class	gbReferenceList-class
geneID	geneID
genomeRecordFromNCBI	genomeRecordFromNCBI
getAccession	accessors
getAccession,gbFeature-method	accessors
getAccession,gbFeatureTable-method	accessors
getAccession,gbLocation-method	accessors
getAccession,gbRecord-method	accessors
getAccession,gbRecordList-method	accessors
getAccession,seqinfo-method	accessors
getComment	accessors
getComment,gbFeature-method	accessors
getComment,gbFeatureTable-method	accessors
getComment,gbRecord-method	accessors
getComment,gbRecordList-method	accessors
getComment,seqinfo-method	accessors
getContigSeq	getContigSeq
getDate	accessors
getDate,gbFeature-method	accessors
getDate,gbFeatureTable-method	accessors
getDate,gbRecord-method	accessors
getDate,gbRecordList-method	accessors
getDate,seqinfo-method	accessors
getDBLink	accessors
getDBLink,gbFeature-method	accessors
getDBLink,gbFeatureTable-method	accessors
getDBLink,gbRecord-method	accessors
getDBLink,gbRecordList-method	accessors
getDBLink,seqinfo-method	accessors
getDBSource	accessors
getDBSource,gbFeature-method	accessors
getDBSource,gbFeatureTable-method	accessors
getDBSource,gbRecord-method	accessors
getDBSource,gbRecordList-method	accessors
getDBSource,seqinfo-method	accessors
getDefinition	accessors
getDefinition,gbFeature-method	accessors
getDefinition,gbFeatureTable-method	accessors
getDefinition,gbRecord-method	accessors
getDefinition,gbRecordList-method	accessors
getDefinition,seqinfo-method	accessors
getDivision	accessors
getDivision,gbFeature-method	accessors
getDivision,gbFeatureTable-method	accessors
getDivision,gbRecord-method	accessors
getDivision,gbRecordList-method	accessors
getDivision,seqinfo-method	accessors
getFeatures	getFeatures-methods
getFeatures,gbRecord-method	getFeatures-methods
getFeatures,gbRecordList-method	getFeatures-methods
getGeneID	accessors
getGeneID,gbFeature-method	accessors
getGeneID,gbFeatureTable-method	accessors
getGeneID,gbRecord-method	accessors
getGeneID,gbRecordList-method	accessors
getGeneID,seqinfo-method	accessors
getHeader	getHeader-methods
getHeader,gbFeature-method	getHeader-methods
getHeader,gbFeatureTable-method	getHeader-methods
getHeader,gbRecord-method	getHeader-methods
getKeywords	accessors
getKeywords,gbFeature-method	accessors
getKeywords,gbFeatureTable-method	accessors
getKeywords,gbRecord-method	accessors
getKeywords,gbRecordList-method	accessors
getKeywords,seqinfo-method	accessors
getLength	accessors
getLength,gbFeature-method	accessors
getLength,gbFeatureTable-method	accessors
getLength,gbRecord-method	accessors
getLength,gbRecordList-method	accessors
getLength,seqinfo-method	accessors
getLocus	accessors
getLocus,gbFeature-method	accessors
getLocus,gbFeatureTable-method	accessors
getLocus,gbRecord-method	accessors
getLocus,gbRecordList-method	accessors
getLocus,seqinfo-method	accessors
getMoltype	accessors
getMoltype,gbFeature-method	accessors
getMoltype,gbFeatureTable-method	accessors
getMoltype,gbRecord-method	accessors
getMoltype,gbRecordList-method	accessors
getMoltype,seqinfo-method	accessors
getOrganism	accessors
getOrganism,gbFeature-method	accessors
getOrganism,gbFeatureTable-method	accessors
getOrganism,gbRecord-method	accessors
getOrganism,gbRecordList-method	accessors
getOrganism,seqinfo-method	accessors
getReference	accessors
getReference,gbFeature-method	accessors
getReference,gbFeatureTable-method	accessors
getReference,gbRecord-method	accessors
getReference,gbRecordList-method	accessors
getReference,seqinfo-method	accessors
getSequence	getSequence-methods
getSequence,gbFeature-method	getSequence-methods
getSequence,gbFeatureTable-method	getSequence-methods
getSequence,gbRecord-method	getSequence-methods
getSequence,gbRecordList-method	getSequence-methods
getSource	accessors
getSource,gbFeature-method	accessors
getSource,gbFeatureTable-method	accessors
getSource,gbRecord-method	accessors
getSource,gbRecordList-method	accessors
getSource,seqinfo-method	accessors
getTaxonomy	accessors
getTaxonomy,gbFeature-method	accessors
getTaxonomy,gbFeatureTable-method	accessors
getTaxonomy,gbRecord-method	accessors
getTaxonomy,gbRecordList-method	accessors
getTaxonomy,seqinfo-method	accessors
getTopology	accessors
getTopology,gbFeature-method	accessors
getTopology,gbFeatureTable-method	accessors
getTopology,gbRecord-method	accessors
getTopology,gbRecordList-method	accessors
getTopology,seqinfo-method	accessors
getVersion	accessors
getVersion,gbFeature-method	accessors
getVersion,gbFeatureTable-method	accessors
getVersion,gbRecord-method	accessors
getVersion,gbRecordList-method	accessors
getVersion,seqinfo-method	accessors
hasKey	hasKey-methods
hasKey,gbFeature-method	hasKey-methods
hasKey,gbFeatureTable-method	hasKey-methods
hasKey,gbRecord-method	hasKey-methods
hasKey,gbRecordList-method	hasKey-methods
hasQualif	hasQualif-methods
hasQualif,gbFeature-method	hasQualif-methods
hasQualif,gbFeatureTable-method	hasQualif-methods
hasQualif,gbRecord-method	hasQualif-methods
hasQualif,gbRecordList-method	hasQualif-methods
has_command	has_command
header	getHeader-methods
header,gbFeature-method	getHeader-methods
header,gbFeatureTable-method	getHeader-methods
header,gbRecord-method	getHeader-methods
index	index-methods
index,gbFeature-method	index-methods
index,gbFeatureTable-method	index-methods
index,gbRecord-method	index-methods
index,gbRecordList-method	index-methods
joint_range	span
joint_range,gbFeature-method	span
joint_range,gbFeatureTable-method	span
joint_range,gbLocation-method	span
key	key-methods
key,gbFeature-method	key-methods
key,gbFeatureTable-method	key-methods
key,gbRecord-method	key-methods
key,gbRecordList-method	key-methods
key<-	key-methods
key<-,gbFeature-method	key-methods
length,gbRecord-method	length-methods
linebreak	linebreak
loadRecord	saveRecord-methods
location	location-methods
location,gbFeature-method	location-methods
location,gbFeatureTable-method	location-methods
location,gbRecord-method	location-methods
locusTag	locusTag
new_gbRecord	gbRecord-class
note	note
pad	pad
product	product
proteinID	proteinID
qualif	qualif-methods
qualif,gbFeature-method	qualif-methods
qualif,gbFeatureTable-method	qualif-methods
qualif,gbRecord-method	qualif-methods
qualif<-	qualif-methods
qualif<-,gbFeature-method	qualif-methods
qualifList	qualifList-methods
qualifList,gbFeature-method	qualifList-methods
qualifList,gbFeatureTable-method	qualifList-methods
qualifList,gbRecord-method	qualifList-methods
qualifTable	qualifTable-methods
qualifTable,gbFeatureTable-method	qualifTable-methods
qualifTable,gbRecord-method	qualifTable-methods
qualifTable,gbRecordList-method	qualifTable-methods
ranges	ranges
ranges,gbFeature-method	ranges
ranges,gbFeatureTable-method	ranges
ranges,gbRecord-method	ranges
ranges,gbRecordList-method	ranges
revcomp	revcomp-methods
revcomp,gbFeatureTable-method	revcomp-methods
revcomp,gbRecord-method	revcomp-methods
saveRecord	saveRecord-methods
saveRecord,gbRecord-method	saveRecord-methods
saveRecord,gbRecordList-method	saveRecord-methods
select	manip-methods
select,gbFeatureTable-method	manip-methods
select,gbRecord-method	manip-methods
select,gbRecordList-method	manip-methods
seqinfo	seqinfo-class
seqinfo-class	seqinfo-class
shift	shift
shift,gbFeature-method	shift
shift,gbFeatureTable-method	shift
shift,gbLocation-method	shift
shift,gbRecord-method	shift
span	span
span,gbFeature-method	span
span,gbFeatureTable-method	span
span,gbLocation-method	span
span,gbRecord-method	span
span,gbRecordList-method	span
start	start
start,gbFeature-method	start
start,gbFeatureTable-method	start
start,gbLocation-method	start
start,gbRecord-method	start
start,gbRecordList-method	start
start<-	start
start<-,gbFeature-method	start
start<-,gbFeatureTable-method	start
start<-,gbLocation-method	start
strand	strand
strand,gbFeature-method	strand
strand,gbFeatureTable-method	strand
strand,gbLocation-method	strand
strand,gbRecord-method	strand
strand,gbRecordList-method	strand
strand<-	strand
strand<-,gbFeature-method	strand
strand<-,gbFeatureTable-method	strand
strand<-,gbLocation-method	strand
summary	summary-methods
summary,gbFeature-method	summary-methods
summary,gbFeatureTable-method	summary-methods
summary,gbRecord-method	summary-methods
summary,gbRecordList-method	summary-methods
translation	translation
uniqueQualifs	uniqueQualifs
upstream	upstream
view	view-methods
view,gbFeatureTable-method	view-methods
write.FeatureTable	write.FeatureTable-methods
write.FeatureTable,gbFeatureTable-method	write.FeatureTable-methods
write.FeatureTable,gbRecord-method	write.FeatureTable-methods
write.GenBank	write.GenBank-methods
write.GenBank,gbFeatureTable-method	write.GenBank-methods
write.GenBank,gbRecord-method	write.GenBank-methods
[,gbFeatureTable,character,missing-method	extract-methods
[,gbFeatureTable,logical,missing-method	extract-methods
[,gbFeatureTable,missing,missing-method	extract-methods
[,gbFeatureTable,numeric,missing-method	extract-methods
[,gbRecord,ANY,missing-method	extract-methods
[,gbRecord,missing,missing-method	extract-methods
[[,gbFeature,character,missing-method	extract-methods
[[,gbFeatureTable,ANY,ANY-method	extract-methods
[[,gbRecord,ANY,ANY-method	extract-methods
