Package: MetaIntegrator
Type: Package
Title: Meta-Analysis of Gene Expression Data
Version: 2.0.0
Date: 2018-09-05
Author: Winston A. Haynes, Francesco Vallania, Aurelie Tomczak, Timothy Sweeney,
    Erika Bongen, Aditya M. Rao, Purvesh Khatri
Maintainer: Aditya M. Rao <adityamr@stanford.edu>
Description: A pipeline for the meta-analysis  of gene expression data. We have
	assembled several analysis and plot functions to
    perform integrated multi-cohort analysis of gene expression data (meta-
    analysis). Methodology described in:
	<http://biorxiv.org/content/early/2016/08/25/071514>.
License: LGPL
biocViews:
Imports: rmeta, multtest, ggplot2, parallel, Rmisc, gplots, Biobase,
        RMySQL, DBI, stringr, preprocessCore, GEOquery, GEOmetadb,
        RSQLite, data.table, ggpubr, ROCR, zoo, pracma, COCONUT,
        Metrics, manhattanly, snplist, DT, pheatmap, plyr, boot, dplyr,
        reshape2, rmarkdown, AnnotationDbi, HGNChelper, magrittr, readr
Suggests: BiocStyle, knitr, RUnit, BiocGenerics
VignetteBuilder: knitr
LazyData: true
RoxygenNote: 6.0.1
Depends: R (>= 3.3)
URL: http://biorxiv.org/content/early/2016/08/25/071514
NeedsCompilation: no
Packaged: 2018-10-05 09:21:50 UTC; adityamr
Repository: CRAN
Date/Publication: 2018-10-05 15:32:30 UTC
Built: R 3.4.4; ; 2019-04-25 23:08:38 UTC; windows
