DSAIDE                  DSAIDE: A package to learn about Dynamical
                        Systems Approaches to Infectious Disease
                        Epidemiology
dsaidemenu              The main menu for the DSAIDE package
generate_documentation
                        A helper function for the UI part of the Shiny
                        apps
generate_fctcall        A function that produces a call to a simulator
                        functions for specific settings
generate_ggplot         A helper function that takes result from the
                        simulators and produces plots
generate_plotly         A helper function that takes result from the
                        simulators and produces plots
generate_shinyinput     A helper function that takes a model and
                        generates the shiny UI elements for the analyze
                        tab
generate_text           A helper function that takes result from the
                        simulators and produces text output
run_model               A function that runs a DSAIRM/DSAIDE app
simulate_directtransmission_ode
                        Simulation of a compartmental infectious
                        disease transmission model illustrating
                        different types of direct transmission
simulate_environmentaltransmission_ode
                        Environmental Transmission model
simulate_evolution_stochastic
                        Stochastic simulation of a compartmental
                        SIR-type model with wild-type and mutant
                        strains and treatment
simulate_heterogeneity_ode
                        Simulation of a compartmental infectious
                        disease transmission model with 2 types of
                        hosts
simulate_idcharacteristics_ode
                        Simulation of an infectious disease
                        transmission model with multiple compartments
simulate_idcontrol_ode
                        Simulation of a compartmental infectious
                        disease transmission model including different
                        control mechanisms
simulate_idpatterns_ode
                        Simulation of a compartmental infectious
                        disease transmission model including
                        seasonality
simulate_modelexploration_sir
                        Simulation to illustrate parameter scan of the
                        basic SIR model with births and deaths #'
simulate_multipathogen_ode
                        Simulation of a compartmental infectious
                        disease transmission model with 2 types of
                        pathogens
simulate_reproductivenumber_ode
                        Simulation of a compartmental infectious
                        disease transmission model to study the
                        reproductive number
simulate_seir_stochastic
                        Stochastic simulation of an SEIR-type model
simulate_sir_discrete   Basic discrete time SIR model
simulate_sir_ode        Basic SIR model
simulate_sirdemographic_ode
                        Basic SIR model with births and deaths
simulate_sirdemographic_stochastic
                        Stochastic simulation of an SIR-type model with
                        births and deaths
simulate_usanalysis_sir
                        Simulation to illustrate uncertainty and
                        sensitivity analysis
simulate_vectortransmission_ode
                        Vector transmission model
