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| rbi-package | RBi - R interface for 'libbi' |
| add_block | Add a block to a LibBi model |
| add_block.bi_model | Add a block to a LibBi model |
| attach_file | Attach a new file to a 'libbi' object |
| attach_file.libbi | Attach a new file to a 'libbi' object |
| bi_contents | Bi contents |
| bi_dim_len | NetCDF dimension length |
| bi_file_summary | NetCDF File Summary |
| bi_generate_dataset | Bi Generate Dataset |
| bi_model | Bi Model |
| bi_open | Bi open |
| bi_read | Bi Read |
| bi_write | Create (init or observation) files for LibBi |
| Extract.bi_model | Subset and replace model lines |
| extract_sample | Extract a sample from a 'LibBi' run. |
| filter | Using the LibBi wrapper to filter |
| filter.bi_model | Using the LibBi wrapper to filter |
| filter.libbi | Using the LibBi wrapper to filter |
| fix | Fix noise term, state or parameter of a libbi model |
| fix.bi_model | Fix noise term, state or parameter of a libbi model |
| get_block | Get the contents of a block in a LibBi model |
| get_block.bi_model | Get the contents of a block in a LibBi model |
| get_name | Get the name of a bi model |
| get_name.bi_model | Get the name of a bi model |
| get_traces | Get the parameter traces |
| insert_lines | Insert lines in a LibBi model |
| insert_lines.bi_model | Insert lines in a LibBi model |
| join | Join multiple 'libbi' objects |
| join.libbi | Join multiple 'libbi' objects |
| libbi | LibBi Wrapper |
| logLik | Using the LibBi wrapper to logLik |
| logLik.libbi | Using the LibBi wrapper to logLik |
| netcdf_create_from_list | Create NetCDF File from R list |
| optimise | Using the LibBi wrapper to optimise |
| optimise.bi_model | Using the LibBi wrapper to optimise |
| optimise.libbi | Using the LibBi wrapper to optimise |
| option_list | Convert string to option list |
| option_string | Convert Options |
| predict | Using the LibBi wrapper to predict |
| predict.libbi | Using the LibBi wrapper to predict |
| RBi | RBi - R interface for 'libbi' |
| rbi | RBi - R interface for 'libbi' |
| read_libbi | Read results of a 'LibBi' run from an RDS file. This completely reconstructs the saved 'LibBi' object |
| remove_lines | Remove line(s) and/or block(s) in a libbi model |
| remove_lines.bi_model | Remove line(s) and/or block(s) in a libbi model |
| replace_all | Replace all instances of a string with another in a model |
| replace_all.bi_model | Replace all instances of a string with another in a model |
| rewrite | Using the LibBi wrapper to rewrite |
| rewrite.bi_model | Using the LibBi wrapper to rewrite |
| rewrite.libbi | Using the LibBi wrapper to rewrite |
| run | Using the LibBi wrapper to launch LibBi |
| run.libbi | Using the LibBi wrapper to launch LibBi |
| sample | Using the LibBi wrapper to sample |
| sample.bi_model | Using the LibBi wrapper to sample |
| sample.libbi | Using the LibBi wrapper to sample |
| save_libbi | Write results of a 'LibBi' run to an RDS file |
| save_libbi.libbi | Write results of a 'LibBi' run to an RDS file |
| set_name | Set the name of a bi model |
| set_name.bi_model | Set the name of a bi model |
| summary | Print summary information about a 'libbi' object |
| summary.libbi | Print summary information about a 'libbi' object |
| var_names | Get variables |
| var_names.bi_model | Get variables |
| write_model | Writes a bi model to a file. |
| write_model.bi_model | Writes a bi model to a file. |
| write_model.libbi | Writes a bi model to a file. |
| [<-.bi_model | Subset and replace model lines |
| `[<-.bi_model` | Subset and replace model lines |