# Perceptual Analysis, Visualization and Organization of Spectral Color Data in R

## Documentation for package ‘pavo’ version 1.3.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

pavo-deprecated-package | Deprecated function(s) in the pavo package
pavo-package | pavo: analyzing color data in R
.PlotTetraEnv | pavo: analyzing color data in R
aggplot | Plot aggregated reflectance spectra
aggspec | Aggregate reflectance spectra
as.rspec | Convert data to an rspec object
axistetra | Plot reference axes in a static tetrahedral colorspace
bgandilum | Default background and illuminant data
bootcoldist | Bootstrap colour distance confidence intervals
coldist | Color distances
colspace | Model spectra in a colorspace
explorespec | Plot spectral curves
flowers | Reflectance spectra from a suite of native Australian flowers, collected around Cairns, Queensland.
flux2irrad | Converts between irradiance and photon (quantum) flux
getspec | Import spectra files
irrad2flux | Converts between irradiance and photon (quantum) flux
is.rspec | Convert data to an rspec object
jnd2xyz | Convert JND distances into perceptually-corrected Cartesian coordinates
legendtetra | Add legend to a static tetrahedral colorspace
merge.rspec | Merge two rspec objects
pavo | pavo: analyzing color data in R
pavo-deprecated | Deprecated function(s) in the pavo package
peakshape | Peak shape descriptors
plot.colspace | Plot spectra in a colourspace
plot.rspec | Plot spectra
plotsmooth | Plot loess smoothed curves
points.colspace | Plot points in a colorspace
procspec | Process spectra
projplot | Hue projection plot
projpoints | Hue projection plot
segclass | Deprecated function(s) in the pavo package
segspace | Segment classification
sensdata | Retrieve or plot in-built data
sensmodel | modeling spectral sensitivity
sicalis | Spectral curves from three body regions of Stripe-Tailed Yellow Finch (_Sicalis citrina_) males
spec2rgb | Spectrum to rgb color conversion
subset.colspace | Subset rspec, vismodel, and colspace objects
subset.rspec | Subset rspec, vismodel, and colspace objects
subset.vismodel | Subset rspec, vismodel, and colspace objects
summary.colspace | Colorspace data summary
summary.rspec | Colorimetric variables
summary.vismodel | Visual model summary
tcs | Deprecated function(s) in the pavo package
tcsplot | Interactive plot of a tetrahedral colorspace
tcspoints | Interactive plot of a tetrahedral colorspace
tcsvol | Interactive plot of a tetrahedral colorspace
teal | Angle-resolved reflectance data for the iridescent wing patch of a male green-winged teal (Anas carolinensis)
transmissiondata | Default ocular transmission data
ttvertex | vertex for the tetrahedral color space
vismodel | Visual models
vissyst | Animal visual systems data
vol | Plot a tetrahedral color space
voloverlap | Color volume overlap