NetGSA                  Network-based Gene Set Analysis
bic.netEst.undir        Bayesian information criterion to select the
                        tuning parameters for 'netEst.undir'
edgelist                An example edge list
edgelist2adj            Construct an adjacency matrix from an edge list
netEst.dir              Constrained estimation of directed networks
netEst.undir            Constrained estimation of undirected networks
netgsa-package          Network-Based Gene Set Analysis
netgsaex2               Toy example for using 'NetGSA' on a two-class
                        test with undirected networks
netgsaex3               Toy example for using 'NetGSA' on a three-class
                        test with undirected networks
netgsaexDAG             Toy example for using 'NetGSA' on a two-class
                        test with directed acyclic graphs
nonedgelist             An example for not-an-edge list
